RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 LIMS3P0CW19 117 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 LIMS4P0CW20 117 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 KITLGP21583 273 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 CRHBPP24387 322 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 ZNF81P51508 661 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 ZNF92Q03936 586 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 ODF4Q2M2E3 257 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 MST1LQ2TV78 715 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 C11orf71Q6IPW1 123 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 BRICD5Q6PL45 260 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 PRSS45Q7RTY3 260 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 OR5AS1Q8N127 324 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 FTMTQ8N4E7 242 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 BHLHE23Q8NDY6 225 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 RORBQ92753 470 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 SGK3Q96BR1 496 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 SIGLEC11Q96RL6 698 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 MND1Q9BWT6 205 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 ISG20L2Q9H9L3 353 aaKnown RBP9.75□□□□□ -0.85
NUP50-216ENST00000486184 FKBP14Q9NWM8 211 aa9.75□□□□□ -0.85
NUP50-216ENST00000486184 AKAP6Q13023 2319 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 APCP25054 2843 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 CHD3Q12873 2000 aaKnown RBP9.74□□□□□ -0.85
NUP50-216ENST00000486184 A0A0U1RQV5 110 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 A0A1B0GVI7 797 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 TMEM129A0AVI4 362 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 ANKRD30BLA7E2S9 258 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 IQCF6A8MYZ5 107 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 H7C417 338 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 SRSF10O75494 262 aaKnown RBP9.74□□□□□ -0.85
NUP50-216ENST00000486184 PNPP00491 289 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 TTRP02766 147 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 UBCP0CG48 685 aaKnown RBP9.74□□□□□ -0.85
NUP50-216ENST00000486184 NAT2P11245 290 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 TNFSF4P23510 183 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 C21orf33P30042 268 aaPredicted RBP9.74□□□□□ -0.85
NUP50-216ENST00000486184 DDOSTP39656 456 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 GABARAPL2P60520 117 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 SLC35A2P78381 396 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 GUCA2AQ02747 115 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 DEFB113Q30KQ7 82 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 OR2G6Q5TZ20 316 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 CATSPERDQ86XM0 798 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 ELMOD2Q8IZ81 293 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 CSNK2A3Q8NEV1 391 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 OR8G5Q8NG78 346 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 OR52N1Q8NH53 320 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 OR51E1Q8TCB6 317 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 SPSB4Q96A44 273 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 PELI1Q96FA3 418 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 PERPQ96FX8 193 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 FAM71F1Q96KD3 344 aaPredicted RBP9.74□□□□□ -0.85
NUP50-216ENST00000486184 DIRC2Q96SL1 478 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 YTHDF1Q9BYJ9 559 aaKnown RBP9.74□□□□□ -0.85
NUP50-216ENST00000486184 COMMD4Q9H0A8 199 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 TPK1Q9H3S4 243 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 PLEKHA1Q9HB21 404 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 BARX1Q9HBU1 254 aaPredicted RBP9.74□□□□□ -0.85
NUP50-216ENST00000486184 TRIM36Q9NQ86 728 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 G6PC2Q9NQR9 355 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 GPR84Q9NQS5 396 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 UBAP1Q9NZ09 502 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 ERVK-18Q9QC07 812 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 ZDHHC8Q9ULC8 765 aa9.74□□□□□ -0.85
NUP50-216ENST00000486184 NOP16Q9Y3C1 178 aaKnown RBP9.74□□□□□ -0.85
NUP50-216ENST00000486184 FLNBO75369 2602 aaKnown RBP9.74□□□□□ -0.85
NUP50-216ENST00000486184 TRBV2A0A0J9YWF9 115 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 hCG_38984A0A1B0GV85 526 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 C5orf63A6NC05 138 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 CD300LBA8K4G0 201 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 C17orf100A8MU93 164 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 OVOL3O00110 214 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 P2RY10O00398 339 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 SPRY3O43610 288 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 RPSAP08865 295 aaKnown RBP9.73□□□□□ -0.85
NUP50-216ENST00000486184 ATP6V1B1P15313 513 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 ZNF12P17014 697 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 GNALP38405 381 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 MAP2K3P46734 347 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 PTH2RP49190 550 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 GSK3AP49840 483 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 CCR9P51686 369 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 ATP5J2P56134 94 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 WNT4P56705 351 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 TAS2R43P59537 309 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 FAM3AP98173 230 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 MVKQ03426 396 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 ALKBH1Q13686 389 aaKnown RBP9.73□□□□□ -0.85
NUP50-216ENST00000486184 TUSC1Q2TAM9 212 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 PCGF3Q3KNV8 242 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 WDR38Q5JTN6 314 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 TMEM244Q5VVB8 128 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 FDX2Q6P4F2 183 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 DOK3Q7L591 496 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 KLBQ86Z14 1044 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 ZNF676Q8N7Q3 588 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 OR2Z1Q8NG97 314 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 OR56B2PQ8NGI1 322 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 OR13G1Q8NGZ3 307 aa9.73□□□□□ -0.85
NUP50-216ENST00000486184 OR2G2Q8NGZ5 317 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms