RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 IFNL4K9M1U5 179 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 ATP5HO75947 161 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 LYNP07948 512 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 MRPL3P09001 348 aaKnown RBP14.82□□□□□ -0.04
COL6A1-204ENST00000486023 PPIAL4FP0DN26 164 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 RPS2P15880 293 aaKnown RBP14.82□□□□□ -0.04
COL6A1-204ENST00000486023 CRISP1P54107 249 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 ZNF121P58317 390 aaPredicted RBP14.82□□□□□ -0.04
COL6A1-204ENST00000486023 APOFQ13790 326 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 ESCO2Q56NI9 601 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 SFRP4Q6FHJ7 346 aaPredicted RBP14.82□□□□□ -0.04
COL6A1-204ENST00000486023 AMIGO2Q86SJ2 522 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 TIGD4Q8IY51 512 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 C1orf87Q8N0U7 546 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 MUC20Q8N307 709 aaPredicted RBP14.82□□□□□ -0.04
COL6A1-204ENST00000486023 OR5K1Q8NHB7 308 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 C22orf15Q8WYQ4 148 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 SGK3Q96BR1 496 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 REEP6Q96HR9 211 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 PGAM5Q96HS1 289 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 TOR3AQ9H497 397 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 PPIAL4AQ9Y536 164 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 STAB1Q9NY15 2570 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 A6NLC8 198 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 ANKRD30BLA7E2S9 258 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 G3V2T6 193 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 TRAPPC2LH3BP13 241 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 XRCC2O43543 280 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 MITFO75030 526 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-204ENST00000486023 FAM20BO75063 409 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 CD200P41217 278 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 SLC16A9Q7RTY1 509 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 NANPQ8TBE9 248 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 RNF133Q8WVZ7 376 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 UTP4Q969X6 686 aaKnown RBP14.81□□□□□ -0.04
COL6A1-204ENST00000486023 NRBF2Q96F24 287 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 TMEM246Q9BRR3 403 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 SLC22A4Q9H015 551 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 OR10A2Q9H208 303 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 SP140LQ9H930 580 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 FN3KRPQ9HA64 309 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 NOP16Q9Y3C1 178 aaKnown RBP14.81□□□□□ -0.04
COL6A1-204ENST00000486023 AP4S1Q9Y587 144 aa14.81□□□□□ -0.04
COL6A1-204ENST00000486023 hCG_1807616A0A1W2PRN6 198 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 J3QLI3 93 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 PSMD9O00233 223 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 GMDSO60547 372 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 CIB2O75838 187 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 APOC1P02654 83 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 WNT2P09544 360 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 EPHA1P21709 976 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 FASP25445 335 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 OPRL1P41146 370 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 SCGB2A2Q13296 93 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 PTGES3Q15185 160 aaKnown RBP14.8□□□□□ -0.04
COL6A1-204ENST00000486023 LRRN1Q6UXK5 716 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 TEX29Q8N6K0 151 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 OR8S1Q8NH09 359 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 OTOSQ8NHW6 89 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 LRTOMTQ8WZ04 291 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 TTTY10Q9BZA0 68 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 SEMA6AQ9H2E6 1030 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 MMADHCQ9H3L0 296 aaPredicted RBP14.8□□□□□ -0.04
COL6A1-204ENST00000486023 MARCH7Q9H992 704 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 KRT84Q9NSB2 600 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 C1orf123Q9NWV4 160 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 MRPL15Q9P015 296 aaKnown RBP14.8□□□□□ -0.04
COL6A1-204ENST00000486023 OR5V1Q9UGF6 321 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 LAMP5Q9UJQ1 280 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 KLHDC2Q9Y2U9 406 aa14.8□□□□□ -0.04
COL6A1-204ENST00000486023 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-204ENST00000486023 C3orf80F5H4A9 247 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 M0R129 80 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 PRODHO43272 600 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 GATA3P23771 443 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 CD80P33681 288 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 GNB2P62879 340 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 FAM3AP98173 230 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 OR8B8Q15620 311 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 ATP6AP1Q15904 470 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 SLC35D3Q5M8T2 416 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 FAHD1Q6P587 224 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 LYPD2Q6UXB3 125 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 ZNF826PQ6ZT77 177 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 BCDIN3DQ7Z5W3 292 aaKnown RBP14.79□□□□□ -0.04
COL6A1-204ENST00000486023 KRT77Q7Z794 578 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 KLBQ86Z14 1044 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 ZNF454Q8N9F8 522 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 ZNF418Q8TF45 676 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-204ENST00000486023 SSBP3Q9BWW4 388 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-204ENST00000486023 OPA3Q9H6K4 179 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 SLC25A19Q9HC21 320 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 ZNF319Q9P2F9 582 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 RNF7Q9UBF6 113 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 MIOXQ9UGB7 285 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 OPN4Q9UHM6 478 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 AUP1Q9Y679 476 aa14.79□□□□□ -0.04
COL6A1-204ENST00000486023 A0A1B0GWJ7 208 aa14.78□□□□□ -0.04
COL6A1-204ENST00000486023 PRKYO43930 277 aa14.78□□□□□ -0.04
COL6A1-204ENST00000486023 VENTXO95231 258 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms