RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 DNM1P46Q6ZS02 220 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 FAM220AQ7Z4H9 259 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 COMMD2Q86X83 199 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 C10orf105Q8TEF2 133 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 RDH5Q92781 318 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 DVL3Q92997 716 aaPredicted RBP10.07□□□□□ -0.8
HPS4-214ENST00000485842 YIPF5Q969M3 257 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 SPSB4Q96A44 273 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 SGK3Q96BR1 496 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 DIRC2Q96SL1 478 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 EGLN1Q9GZT9 426 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 PBOV1Q9GZY1 135 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 NKIRAS2Q9NYR9 191 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 GNG8Q9UK08 70 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 EXOGQ9Y2C4 368 aaKnown RBP10.07□□□□□ -0.8
HPS4-214ENST00000485842 RPL36Q9Y3U8 105 aaKnown RBP10.07□□□□□ -0.8
HPS4-214ENST00000485842 PCDHGB1Q9Y5G3 927 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 R4GMQ9 66 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 FLNAP21333 2647 aaKnown RBP10.06□□□□□ -0.8
HPS4-214ENST00000485842 F8P00451 2351 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 IGHV3-64DA0A0J9YX35 117 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 hCG_38984A0A1B0GV85 526 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 LOC390937A0A1W2PQ73 354 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 MLNRO43193 412 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 FADS2O95864 444 aaKnown RBP10.06□□□□□ -0.8
HPS4-214ENST00000485842 PNPP00491 289 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 HLA-DPB1P04440 258 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 CA6P23280 308 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 CFL1P23528 166 aaKnown RBP10.06□□□□□ -0.8
HPS4-214ENST00000485842 COL8A2P25067 703 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 DCTDP32321 178 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 PSMB10P40306 273 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 ISL1P61371 349 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 FAM3AP98173 230 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 RAB40BQ12829 278 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 KLHL22Q53GT1 634 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 SPRNQ5BIV9 151 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 CIARTQ8N365 385 aaPredicted RBP10.06□□□□□ -0.8
HPS4-214ENST00000485842 ZNF786Q8N393 782 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 ACBD7Q8N6N7 88 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 MAPK1IP1LQ8NDC0 245 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 OR52I1Q8NGK6 324 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 OR13G1Q8NGZ3 307 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 ITLN1Q8WWA0 313 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 TFAP2CQ92754 450 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 PPP1R14AQ96A00 147 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 SLC30A2Q9BRI3 323 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 REG4Q9BYZ8 158 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 RGCCQ9H4X1 137 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 MOB1AQ9H8S9 216 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 TMEM100Q9NV29 134 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 TREM2Q9NZC2 230 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 NUFIP1Q9UHK0 495 aaKnown RBP10.06□□□□□ -0.8
HPS4-214ENST00000485842 MYRFQ9Y2G1 1151 aa10.06□□□□□ -0.8
HPS4-214ENST00000485842 TANC2Q9HCD6 1990 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 IGHV1-69-2A0A0G2JMI3 117 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 ACOD1A6NK06 481 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 F5H5P2 479 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 H0YJX3 145 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 J3QRE1 110 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 NDUFS8O00217 210 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 SRSF10O75494 262 aaKnown RBP10.05□□□□□ -0.8
HPS4-214ENST00000485842 SULT1C4O75897 302 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 CD55P08174 381 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 SLC25A16P16260 332 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 GSK3AP49840 483 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 MMP16P51512 607 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 HNRNPA0Q13151 305 aaKnown RBP10.05□□□□□ -0.8
HPS4-214ENST00000485842 OR8G1Q15617 311 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 ODF4Q2M2E3 257 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 ZNF684Q5T5D7 378 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 LIPNQ5VXI9 398 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 LHFPL3Q86UP9 236 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 MRPL48Q96GC5 212 aaKnown RBP10.05□□□□□ -0.8
HPS4-214ENST00000485842 FAM71F1Q96KD3 344 aaPredicted RBP10.05□□□□□ -0.8
HPS4-214ENST00000485842 C18orf12Q96KH6 178 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 COX4I2Q96KJ9 171 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 LYZL4Q96KX0 146 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 OR2V2Q96R30 315 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 SIGLEC11Q96RL6 698 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 SOX7Q9BT81 388 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 ADAT1Q9BUB4 502 aaKnown RBP10.05□□□□□ -0.8
HPS4-214ENST00000485842 ALG8Q9BVK2 526 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 BPESC1Q9GZL8 116 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 CHODLQ9H9P2 273 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 GPR84Q9NQS5 396 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 ZNF275Q9NSD4 429 aaPredicted RBP10.05□□□□□ -0.8
HPS4-214ENST00000485842 ACOXLQ9NUZ1 547 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 OR52A1Q9UKL2 312 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 SLC22A13Q9Y226 551 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 SNX5Q9Y5X3 404 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 CACNG2Q9Y698 323 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 HSPE1-MOB4S4R3N1 261 aa10.05□□□□□ -0.8
HPS4-214ENST00000485842 CR1P17927 2039 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 A0A0U1RQV5 110 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 ANKRD30BLA7E2S9 258 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 VWC2LB2RUY7 222 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 J3QLW9 94 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 PPIHO43447 177 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms