RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 PAK1IP1Q9NWT1 392 aaPredicted RBP17.02■□□□□ 0.32
COL6A2-208ENST00000485591 CHCHD3Q9NX63 227 aaKnown RBP17.02■□□□□ 0.32
COL6A2-208ENST00000485591 OR52A1Q9UKL2 312 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 GTF2A1LQ9UNN4 478 aa17.02■□□□□ 0.32
COL6A2-208ENST00000485591 CAB39Q9Y376 341 aaPredicted RBP17.02■□□□□ 0.32
COL6A2-208ENST00000485591 ITPR2Q14571 2701 aa17.02■□□□□ 0.31
COL6A2-208ENST00000485591 hCG_38984A0A1B0GV85 526 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 PLSCR5A0PG75 271 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 PTGES3LE9PB15 166 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 IGLV3-1P01715 115 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 TTRP02766 147 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 MT-ND5P03915 603 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 C21orf33P30042 268 aaPredicted RBP17.01■□□□□ 0.31
COL6A2-208ENST00000485591 PSMB10P40306 273 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 PRSS12P56730 875 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 FAM3AP98173 230 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 GFOD2Q3B7J2 385 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 ZMAT1Q5H9K5 638 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 OR2T2Q6IF00 324 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 FDX2Q6P4F2 183 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 TMPRSS11AQ6ZMR5 421 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 KLHL36Q8N4N3 616 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 OR52N1Q8NH53 320 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 HAVCR2Q8TDQ0 301 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 TRMT61AQ96FX7 289 aaKnown RBP17.01■□□□□ 0.31
COL6A2-208ENST00000485591 GSX2Q9BZM3 304 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 BLOC1S6Q9UL45 172 aa17.01■□□□□ 0.31
COL6A2-208ENST00000485591 CHD3Q12873 2000 aaKnown RBP17.01■□□□□ 0.31
COL6A2-208ENST00000485591 PTH2RP49190 550 aa17■□□□□ 0.31
COL6A2-208ENST00000485591 WDR38Q5JTN6 314 aa17■□□□□ 0.31
COL6A2-208ENST00000485591 RNLSQ5VYX0 342 aa17■□□□□ 0.31
COL6A2-208ENST00000485591 LRRC75A-AS1Q8N1F1 130 aa17■□□□□ 0.31
COL6A2-208ENST00000485591 PPP1R14AQ96A00 147 aa17■□□□□ 0.31
COL6A2-208ENST00000485591 LYZL4Q96KX0 146 aa17■□□□□ 0.31
COL6A2-208ENST00000485591 CLEC2DQ9UHP7 191 aa17■□□□□ 0.31
COL6A2-208ENST00000485591 POLQO75417 2590 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 GGT3PA6NGU5 568 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 ZSCAN5BA6NJL1 495 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 CD300LBA8K4G0 201 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 CYSRT1A8MQ03 144 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 C17orf100A8MU93 164 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 HTR1AP08908 422 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 NAT2P11245 290 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 DDOSTP39656 456 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 ZNF81P51508 661 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 OR8B8Q15620 311 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 OR2G6Q5TZ20 316 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 OR5AS1Q8N127 324 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 PRSS35Q8N3Z0 413 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 OR8G5Q8NG78 346 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 OR2G2Q8NGZ5 317 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 SPRYD4Q8WW59 207 aaPredicted RBP16.99■□□□□ 0.31
COL6A2-208ENST00000485591 SGCDQ92629 289 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 GTF3AQ92664 365 aaKnown RBP16.99■□□□□ 0.31
COL6A2-208ENST00000485591 ITFG2Q969R8 447 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 SORCS2Q96PQ0 1159 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 VRK1Q99986 396 aaPredicted RBP16.99■□□□□ 0.31
COL6A2-208ENST00000485591 CDCA4Q9BXL8 241 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 RAB1BQ9H0U4 201 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 SLC22A13Q9Y226 551 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 PDZD2O15018 2839 aa16.99■□□□□ 0.31
COL6A2-208ENST00000485591 ERCC1P07992 297 aaPredicted RBP16.98■□□□□ 0.31
COL6A2-208ENST00000485591 ADH4P08319 380 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 KIR3DL2P43630 455 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 TGM4P49221 684 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 GSK3AP49840 483 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 CCR9P51686 369 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 GBX2P52951 348 aaPredicted RBP16.98■□□□□ 0.31
COL6A2-208ENST00000485591 NANOS3P60323 173 aaKnown RBP16.98■□□□□ 0.31
COL6A2-208ENST00000485591 ZCCHC24Q8N2G6 241 aaKnown RBP16.98■□□□□ 0.31
COL6A2-208ENST00000485591 ZNF485Q8NCK3 441 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 BHLHE23Q8NDY6 225 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 OR56B2PQ8NGI1 322 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 OR51E1Q8TCB6 317 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 PERPQ96FX8 193 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 TPK1Q9H3S4 243 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 MSL2Q9HCI7 577 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 GPR84Q9NQS5 396 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 FRRS1LQ9P0K9 344 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 ERVK-18Q9QC07 812 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 ZDHHC8Q9ULC8 765 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 LRRC42Q9Y546 428 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 TACC2O95359 2948 aa16.98■□□□□ 0.31
COL6A2-208ENST00000485591 A0A1B0GWJ7 208 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 LOC390937A0A1W2PQ73 354 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 MYL12BO14950 172 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 RGS10O43665 173 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 LILRA1O75019 489 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 UBCP0CG48 685 aaKnown RBP16.97■□□□□ 0.31
COL6A2-208ENST00000485591 CCL1P22362 96 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 ATP5J2P56134 94 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 GABARAPL2P60520 117 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 TNK1Q13470 666 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 ALKBH1Q13686 389 aaKnown RBP16.97■□□□□ 0.31
COL6A2-208ENST00000485591 PCGF3Q3KNV8 242 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 Q6ZR03 302 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 COMMD2Q86X83 199 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 PLPP7Q8NBV4 271 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 DIRC2Q96SL1 478 aa16.97■□□□□ 0.31
COL6A2-208ENST00000485591 SLC30A2Q9BRI3 323 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms