RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 IL17RELQ6ZVW7 336 aa13.71□□□□□ -0.21
DDR1-246ENST00000485023 MOGAT3Q86VF5 341 aa13.71□□□□□ -0.21
DDR1-246ENST00000485023 HPS1Q92902 700 aa13.71□□□□□ -0.21
DDR1-246ENST00000485023 SLC29A1Q99808 456 aa13.71□□□□□ -0.21
DDR1-246ENST00000485023 GAL3ST1Q99999 423 aa13.71□□□□□ -0.21
DDR1-246ENST00000485023 REPIN1Q9BWE0 567 aaKnown RBP13.71□□□□□ -0.21
DDR1-246ENST00000485023 UBAP1Q9NZ09 502 aa13.71□□□□□ -0.21
DDR1-246ENST00000485023 KCNS2Q9ULS6 477 aa13.71□□□□□ -0.21
DDR1-246ENST00000485023 FN1P02751 2386 aaKnown RBP13.71□□□□□ -0.22
DDR1-246ENST00000485023 FAM157AC9JC47 383 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 ZNF205O95201 554 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 CYB5R3P00387 301 aaPredicted RBP13.7□□□□□ -0.22
DDR1-246ENST00000485023 CXCR4P61073 352 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 FAM3AP98173 230 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 SLC3A1Q07837 685 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 KCTD18Q6PI47 426 aaPredicted RBP13.7□□□□□ -0.22
DDR1-246ENST00000485023 PLEKHG7Q6ZR37 379 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 ZBTB49Q6ZSB9 765 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 RHOUQ7L0Q8 258 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 PEG10Q86TG7 708 aaKnown RBP13.7□□□□□ -0.22
DDR1-246ENST00000485023 LINC01356Q8N9X3 169 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 OR8B12Q8NGG6 310 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 OR52H1Q8NGJ2 320 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 OR8J1Q8NGP2 316 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 OR8B4Q96RC9 309 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 MROQ9BYG7 248 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 OPA3Q9H6K4 179 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 SP140LQ9H930 580 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 GCM1Q9NP62 436 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 UFSP2Q9NUQ7 469 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 AASSQ9UDR5 926 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 GTF2A1LQ9UNN4 478 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 NPTNQ9Y639 398 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 TMEM14AQ9Y6G1 99 aa13.7□□□□□ -0.22
DDR1-246ENST00000485023 hCG_38984A0A1B0GV85 526 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 ZNF670-ZNF695F2Z2N8 137 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 LMX1BO60663 402 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 CRLF1O75462 422 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 SBK2P0C263 348 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 HTR1FP30939 366 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 CDH15P55291 814 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 ZSCAN26Q16670 478 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 ZNF322Q6U7Q0 402 aaPredicted RBP13.69□□□□□ -0.22
DDR1-246ENST00000485023 COMMD2Q86X83 199 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 SPSB4Q96A44 273 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 HRASLS5Q96KN8 279 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 SIGLEC11Q96RL6 698 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 APOL4Q9BPW4 351 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 ZNF665Q9H7R5 613 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 WARS2Q9UGM6 360 aaKnown RBP13.69□□□□□ -0.22
DDR1-246ENST00000485023 GMPPBQ9Y5P6 360 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 TANC2Q9HCD6 1990 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 HIVEP2P31629 2446 aa13.69□□□□□ -0.22
DDR1-246ENST00000485023 TMEM269A0A1B0GVZ9 245 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 ANKRD30BLA7E2S9 258 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 ATP6V1E1P36543 226 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 GSK3AP49840 483 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 RIDAP52758 137 aaKnown RBP13.68□□□□□ -0.22
DDR1-246ENST00000485023 LMO4P61968 165 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 HOXA4Q00056 320 aaPredicted RBP13.68□□□□□ -0.22
DDR1-246ENST00000485023 MFGE8Q08431 387 aaPredicted RBP13.68□□□□□ -0.22
DDR1-246ENST00000485023 MAB21L1Q13394 359 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 RCN1Q15293 331 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 LRRC36Q1X8D7 754 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 SSX6Q7RTT6 188 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 ZNF679Q8IYX0 411 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 OR10H4Q8NGA5 316 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 ASB17Q8WXJ9 295 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 PPP1R3EQ9H7J1 279 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 NIPAL2Q9H841 368 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 CLN6Q9NWW5 311 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 FAM206AQ9NX38 181 aa13.68□□□□□ -0.22
DDR1-246ENST00000485023 MRPL15Q9P015 296 aaKnown RBP13.68□□□□□ -0.22
DDR1-246ENST00000485023 ABCA2Q9BZC7 2435 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 A0A1B0GWJ7 208 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 ERICH4A6NGS2 130 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 TMEM178BH3BS89 294 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 ENTPD6O75354 484 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 IGHV2-70P01814 119 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 ANPEPP15144 967 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 PMELP40967 661 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 CD200P41217 278 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 BTG1P62324 171 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 ROM1Q03395 351 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 ZMYND11Q15326 602 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 MPPED2Q15777 294 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 FAM201AQ5SY85 155 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 GALNT4Q8N4A0 578 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 OR8S1Q8NH09 359 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 RFKQ969G6 155 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 PPP1R14AQ96A00 147 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 RAB39BQ96DA2 213 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 LYZL4Q96KX0 146 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 PAPOLGQ9BWT3 736 aaKnown RBP13.67□□□□□ -0.22
DDR1-246ENST00000485023 PBOV1Q9GZY1 135 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 SLC22A4Q9H015 551 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 HAO2Q9NYQ3 351 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 ABCA1O95477 2261 aa13.67□□□□□ -0.22
DDR1-246ENST00000485023 NIPBLQ6KC79 2804 aaeCLIP13.66□□□□□ -0.22
DDR1-246ENST00000485023 B4DSR2 109 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms