RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ANKDD1AQ495B1 522 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 HCP5Q6MZN7 132 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 PGBD2Q6P3X8 592 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 PTCHD4Q6ZW05 846 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 MRPL21Q7Z2W9 205 aaKnown RBP8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 WDR86Q86TI4 376 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 NDUFA11Q86Y39 141 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 LINC00346Q8IVM7 164 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 PLPP7Q8NBV4 271 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 WFDC9Q8NEX5 89 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 WIPF2Q8TF74 440 aaPredicted RBP8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 PRRC1Q96M27 445 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 DCTN5Q9BTE1 182 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 CCDC28BQ9BUN5 200 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 ZNF702PQ9H963 129 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 NMNAT1Q9HAN9 279 aaPredicted RBP8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 VSX1Q9NZR4 365 aaPredicted RBP8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 PRPF19Q9UMS4 504 aaKnown RBP8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 NDUFAF1Q9Y375 327 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 SNX13Q9Y5W8 968 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 STAB2Q8WWQ8 2551 aa8.84□□□□□ -0.99
SMARCC1-205ENST00000483847 HTR3EA5X5Y0 456 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 ACOT8O14734 319 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 TFF1P04155 84 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 ZNF92Q03936 586 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 ACSM1Q08AH1 577 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 TRAP1Q12931 704 aaKnown RBP8.83□□□□□ -1
SMARCC1-205ENST00000483847 NFYCQ13952 458 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 LRRC75BQ2VPJ9 315 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 SNAI3Q3KNW1 292 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 RABL3Q5HYI8 236 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 TBPL2Q6SJ96 375 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 C11orf53Q8IXP5 236 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 FAM156AQ8NDB6 213 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 OR51G2Q8NGK0 314 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 OR2AE1Q8NHA4 323 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 SLC7A13Q8TCU3 470 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 LRRC29Q8WV35 223 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 ACOT11Q8WXI4 607 aaPredicted RBP8.83□□□□□ -1
SMARCC1-205ENST00000483847 H1FXQ92522 213 aaKnown RBP8.83□□□□□ -1
SMARCC1-205ENST00000483847 NKX3-1Q99801 234 aaPredicted RBP8.83□□□□□ -1
SMARCC1-205ENST00000483847 NPFFR1Q9GZQ6 430 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 SLC22A4Q9H015 551 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 AURKCQ9UQB9 309 aa8.83□□□□□ -1
SMARCC1-205ENST00000483847 A0A087WUU8 490 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 J3KTA2 159 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 FFAR1O14842 300 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 ANGPT2O15123 496 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 NDUFB3O43676 98 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 CDKN2AP42771 156 aaKnown RBP8.82□□□□□ -1
SMARCC1-205ENST00000483847 TGM4P49221 684 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 BMXP51813 675 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 MICBQ29980 383 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 ZBED5Q49AG3 693 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 CYBRD1Q53TN4 286 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 SLC18B1Q6NT16 456 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 LNX2Q8N448 690 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 OR5T2Q8NGG2 359 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 C8orf46Q8TAG6 207 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 PIFOQ8TCI5 191 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 TPD52L3Q96J77 140 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 DMRTB1Q96MA1 342 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 OR5M11Q96RB7 305 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 PITX2Q99697 317 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 ATF6BQ99941 703 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 B9D2Q9BPU9 175 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 FAM234AQ9H0X4 552 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 PNRC2Q9NPJ4 139 aaKnown RBP8.82□□□□□ -1
SMARCC1-205ENST00000483847 NOP16Q9Y3C1 178 aaKnown RBP8.82□□□□□ -1
SMARCC1-205ENST00000483847 CAPN7Q9Y6W3 813 aa8.82□□□□□ -1
SMARCC1-205ENST00000483847 SACSQ9NZJ4 4579 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 IGLV1-36A0A0B4J1U3 117 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 A0A1W2PRX2 142 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 GGT3PA6NGU5 568 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 MUC1P15941 1255 aaPredicted RBP8.81□□□□□ -1
SMARCC1-205ENST00000483847 SDHAP31040 664 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 GGT2P36268 569 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 MDH1P40925 334 aaKnown RBP8.81□□□□□ -1
SMARCC1-205ENST00000483847 CSNK2BP67870 215 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 COL10A1Q03692 680 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 ECH1Q13011 328 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 TRAM2Q15035 370 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 LRRC23Q53EV4 343 aaPredicted RBP8.81□□□□□ -1
SMARCC1-205ENST00000483847 GLYATL3Q5SZD4 288 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 NCR3LG1Q68D85 454 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 NANOGP8Q6NSW7 305 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 WDR93Q6P2C0 686 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 WDR82Q6UXN9 313 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 TMPRSS11FQ6ZWK6 438 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 MBOAT2Q6ZWT7 520 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 SLC36A1Q7Z2H8 476 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 TSEN54Q7Z6J9 526 aaKnown RBP8.81□□□□□ -1
SMARCC1-205ENST00000483847 OFCC1Q8IZS5 231 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 PAPD5Q8NDF8 572 aaKnown RBP8.81□□□□□ -1
SMARCC1-205ENST00000483847 SLC26A10Q8NG04 563 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 C7orf26Q96N11 449 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 DDOQ99489 341 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 MEGF9Q9H1U4 602 aa8.81□□□□□ -1
SMARCC1-205ENST00000483847 METTL8Q9H825 291 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms