RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 FAM3AP98173 230 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 SLC25A30Q5SVS4 291 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 FAM57BQ71RH2 274 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 KRT77Q7Z794 578 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 ZNF679Q8IYX0 411 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 REEP6Q96HR9 211 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 OR8B4Q96RC9 309 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 SIGLEC11Q96RL6 698 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 SLC29A1Q99808 456 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 CLN6Q9NWW5 311 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 DNAJC27Q9NZQ0 273 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 LOC100289279A0A1B0GTE1 492 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 GGT3PA6NGU5 568 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 F5H5P2 479 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 PHYHO14832 338 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 TBX1O43435 398 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 GMDSO60547 372 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 CRLF1O75462 422 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 SBK2P0C263 348 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 MMP16P51512 607 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 MVKQ03426 396 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 POU4F2Q12837 409 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 MAB21L1Q13394 359 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 TIGD6Q17RP2 521 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 ZNF181Q2M3W8 571 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 AVPI1Q5T686 147 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 FAM166AQ6J272 317 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 KLBQ86Z14 1044 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 SLC35F2Q8IXU6 374 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 LINC01356Q8N9X3 169 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 OR56B2PQ8NGI1 322 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 FAM81AQ8TBF8 368 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 STMN2Q93045 179 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 EME1Q96AY2 570 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 MBOAT4Q96T53 435 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 MROQ9BYG7 248 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 FAM206AQ9NX38 181 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 DCAF16Q9NXF7 216 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 TREM2Q9NZC2 230 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 ZNF391Q9UJN7 358 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 PPP1R3CQ9UQK1 317 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 NPTNQ9Y639 398 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 SVEP1Q4LDE5 3571 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 JMJD1CQ15652 2540 aa15.19■□□□□ 0.02
HDAC6-225ENST00000483506 LMX1BO60663 402 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 FSTL3O95633 263 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 IGHV2-70P01814 119 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 HLA-DPB1P04440 258 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 SNRPGP62308 76 aaKnown RBP15.18■□□□□ 0.02
HDAC6-225ENST00000483506 OR8B8Q15620 311 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 ZSCAN26Q16670 478 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 KRTAP21-3Q3LHN1 58 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 ZBTB49Q6ZSB9 765 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 PEG10Q86TG7 708 aaKnown RBP15.18■□□□□ 0.02
HDAC6-225ENST00000483506 RFLNBQ8N5W9 214 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 OR8B12Q8NGG6 310 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 Q8TCH9 128 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 RFKQ969G6 155 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 ITFG2Q969R8 447 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 ERGIC1Q969X5 290 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 PGAM5Q96HS1 289 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 NARFLQ9H6Q4 476 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 N6AMT1Q9Y5N5 214 aa15.18■□□□□ 0.02
HDAC6-225ENST00000483506 B4DSR2 109 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 TMEM178BH3BS89 294 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 IGHV2-5P01817 119 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 CA6P23280 308 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 GSK3AP49840 483 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 CXCR4P61073 352 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 GABPB1Q06547 395 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-225ENST00000483506 EGR3Q06889 387 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 ZIK1Q3SY52 487 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-225ENST00000483506 ZNF322Q6U7Q0 402 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-225ENST00000483506 SPERTQ8NA61 448 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 PLPP7Q8NBV4 271 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 OR51G2Q8NGK0 314 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 ADAT1Q9BUB4 502 aaKnown RBP15.17■□□□□ 0.02
HDAC6-225ENST00000483506 ZNF665Q9H7R5 613 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 BRD7Q9NPI1 651 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 IMPAD1Q9NX62 359 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 KCNS2Q9ULS6 477 aa15.17■□□□□ 0.02
HDAC6-225ENST00000483506 A0A0U1RQV5 110 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 FAM157AC9JC47 383 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 SRSF10O75494 262 aaKnown RBP15.16■□□□□ 0.02
HDAC6-225ENST00000483506 TGFAP01135 160 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 IGLV3-1P01715 115 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 RIDAP52758 137 aaKnown RBP15.16■□□□□ 0.02
HDAC6-225ENST00000483506 DVL1P1P54792 670 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-225ENST00000483506 HNRNPA0Q13151 305 aaKnown RBP15.16■□□□□ 0.02
HDAC6-225ENST00000483506 OR8G1Q15617 311 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 SNCBQ16143 134 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 OCLNQ16625 522 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 ZNF829Q3KNS6 432 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-225ENST00000483506 TMEM155Q4W5P6 130 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 KRT74Q7RTS7 529 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 CSNK2A3Q8NEV1 391 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 UBE2FQ969M7 185 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 RAB39BQ96DA2 213 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 RDH12Q96NR8 316 aa15.16■□□□□ 0.02
HDAC6-225ENST00000483506 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms