RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 FUZQ9BT04 418 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 SIRPDQ9H106 197 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 OR52D1Q9H346 318 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 FN3KRPQ9HA64 309 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 NOX4Q9NPH5 578 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 ACOXLQ9NUZ1 547 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 CYB5R1Q9UHQ9 305 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 FAM32AQ9Y421 112 aaKnown RBP11.5□□□□□ -0.57
VARS-226ENST00000483275 RNF114Q9Y508 228 aa11.5□□□□□ -0.57
VARS-226ENST00000483275 A0A1W2PRD5 423 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 A0A1W2PRF3 423 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 A0A1W2PRM7 423 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 M0R135 149 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 GMNNO75496 209 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 FSTL3O95633 263 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 RHCEP18577 417 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 PSME3P61289 254 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 SPIBQ01892 262 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 RFX4Q33E94 735 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 ZNF362Q5T0B9 420 aaPredicted RBP11.49□□□□□ -0.57
VARS-226ENST00000483275 METTL11BQ5VVY1 283 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 PGM2L1Q6PCE3 622 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 BTN2A1Q7KYR7 527 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 CELF2-AS1Q8N7Q2 184 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 CYB561A3Q8NBI2 242 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 SCCPDHQ8NBX0 429 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 OR51L1Q8NGJ5 315 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 LINC01006Q8NI28 216 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 ST8SIA4Q92187 359 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 UBE2FQ969M7 185 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 SEH1LQ96EE3 360 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 ZNF799Q96GE5 643 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 DHRS1Q96LJ7 313 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 MMP27Q9H306 513 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 KIF17Q9P2E2 1029 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 ERVK-18Q9QC07 812 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 TAGLN3Q9UI15 199 aa11.49□□□□□ -0.57
VARS-226ENST00000483275 TET2Q6N021 2002 aaPredicted RBP11.48□□□□□ -0.57
VARS-226ENST00000483275 A0A0G2JK05 382 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 A0A1B0GUS0 222 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 OOEPA6NGQ2 149 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 GGT3PA6NGU5 568 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 DVL1O14640 695 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 FAM107AO95990 144 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 TFF1P04155 84 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 NOS3P29474 1203 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 SLC6A6P31641 620 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 TPTEP56180 551 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 ZBTB46Q86UZ6 589 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 GCSAMQ8N6F7 178 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 CCDC197Q8NCU1 140 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 OR56B2PQ8NGI1 322 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 FAM110DQ8TAY7 271 aaPredicted RBP11.48□□□□□ -0.57
VARS-226ENST00000483275 FAM71F1Q96KD3 344 aaPredicted RBP11.48□□□□□ -0.57
VARS-226ENST00000483275 EGLN3Q9H6Z9 239 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 PPP1R3EQ9H7J1 279 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 SPAG4Q9NPE6 437 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 NDE1Q9NXR1 346 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 ONECUT1Q9UBC0 465 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 POMT1Q9Y6A1 747 aa11.48□□□□□ -0.57
VARS-226ENST00000483275 SELLP14151 372 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 IER3P46695 156 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 NPY4RP50391 375 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 PRKXP51817 358 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 MNAT1P51948 309 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 PROK1P58294 105 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 GMFBP60983 142 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.47□□□□□ -0.57
VARS-226ENST00000483275 ECH1Q13011 328 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 KLRD1Q13241 179 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 TAF9Q16594 264 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 SLC36A3Q495N2 470 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 CD276Q5ZPR3 534 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 C16orf89Q6UX73 402 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 VMO1Q7Z5L0 202 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 WDR86Q86TI4 376 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 PNKDQ8N490 385 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 FAM216BQ8N7L0 139 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 PNLDC1Q8NA58 520 aaKnown RBP11.47□□□□□ -0.57
VARS-226ENST00000483275 PROKR2Q8NFJ6 384 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 OR9Q1Q8NGQ5 310 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 DYRK2Q92630 601 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 ERGIC1Q969X5 290 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 TRIM15Q9C019 465 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 TCF7L1Q9HCS4 588 aa11.47□□□□□ -0.57
VARS-226ENST00000483275 KRCC1Q9NPI7 259 aaPredicted RBP11.47□□□□□ -0.57
VARS-226ENST00000483275 TIMM23O14925 209 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 ARPC3O15145 178 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 GADD45GO95257 159 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 PTBP3O95758 552 aaKnown RBP11.46□□□□□ -0.57
VARS-226ENST00000483275 MSX2P35548 267 aaPredicted RBP11.46□□□□□ -0.57
VARS-226ENST00000483275 CSNK2BP67870 215 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 KRT72Q14CN4 511 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 PDCD1Q15116 288 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 PCK2Q16822 640 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 GLYATQ6IB77 296 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 Q6ZSV7 163 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 TBC1D15Q8TC07 691 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms