RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 SELENOVP59797 346 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 GK2Q14410 553 aaPredicted RBP10.51□□□□□ -0.73
SDC1-206ENST00000482879 MSMPQ1L6U9 139 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 ARMCX4Q5H9R4 360 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 TMEM244Q5VVB8 128 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 FBXW12Q6X9E4 464 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 PGAP1Q75T13 922 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 ZNF295-AS1Q8N0V1 137 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 SYNPRQ8TBG9 265 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 RPS4Y2Q8TD47 263 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 GHSRQ92847 366 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 UFD1Q92890 307 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 SPSB4Q96A44 273 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 HAVCR1Q96D42 359 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 SMIM19Q96E16 107 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 FAM71F1Q96KD3 344 aaPredicted RBP10.51□□□□□ -0.73
SDC1-206ENST00000482879 LYZL4Q96KX0 146 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 OPALINQ96PE5 141 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 DHRS9Q9BPW9 319 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 PDCD1LG2Q9BQ51 273 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 SOX7Q9BT81 388 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 REPIN1Q9BWE0 567 aaKnown RBP10.51□□□□□ -0.73
SDC1-206ENST00000482879 OPA3Q9H6K4 179 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 DUSP13Q9UII6 198 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 ZNF391Q9UJN7 358 aa10.51□□□□□ -0.73
SDC1-206ENST00000482879 A0A1B0GTI1 187 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 GGT3PA6NGU5 568 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 H3BSA7 217 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 HS3ST1O14792 307 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 SYT7O43581 403 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 PLPP2O43688 288 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 CLPTM1O96005 669 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 IGLV3-1P01715 115 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 ISG15P05161 165 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 CD1AP06126 327 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 ZNF250P15622 560 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 CPEP16870 476 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 JUNBP17275 347 aaPredicted RBP10.5□□□□□ -0.73
SDC1-206ENST00000482879 ACHEP22303 614 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 GSK3AP49840 483 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 FAM3AP98173 230 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 TLE4Q04727 773 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 PSG7Q13046 419 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 GPR50Q13585 617 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 TPBGQ13641 420 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 ADIPOQQ15848 244 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 TSTQ16762 297 aaKnown RBP10.5□□□□□ -0.73
SDC1-206ENST00000482879 LIPKQ5VXJ0 399 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 MBNL2Q5VZF2 373 aaKnown RBP10.5□□□□□ -0.73
SDC1-206ENST00000482879 HIST2H2BCQ6DN03 193 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 OR2T2Q6IF00 324 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 DOK3Q7L591 496 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 LRP11Q86VZ4 500 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 FBXW5Q969U6 566 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 MUL1Q969V5 352 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 MRPL24Q96A35 216 aaKnown RBP10.5□□□□□ -0.73
SDC1-206ENST00000482879 C14orf79Q96F83 325 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 SYT3Q9BQG1 590 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 MRPL37Q9BZE1 423 aaKnown RBP10.5□□□□□ -0.73
SDC1-206ENST00000482879 CLEC4MQ9H2X3 399 aaPredicted RBP10.5□□□□□ -0.73
SDC1-206ENST00000482879 UBTD1Q9HAC8 227 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 HHLA2Q9UM44 414 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 ZNF281Q9Y2X9 895 aa10.5□□□□□ -0.73
SDC1-206ENST00000482879 RAI1Q7Z5J4 1906 aaPredicted RBP10.5□□□□□ -0.73
SDC1-206ENST00000482879 CACNA1DQ01668 2161 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 hCG_38984A0A1B0GV85 526 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 LOC107986453A0A1B0GWG9 222 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 MTRF1O75570 445 aaKnown RBP10.49□□□□□ -0.73
SDC1-206ENST00000482879 SELEP16581 610 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 SERPINF1P36955 418 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 MAP2K3P46734 347 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 KLF3P57682 345 aaPredicted RBP10.49□□□□□ -0.73
SDC1-206ENST00000482879 ALKBH6Q3KRA9 238 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 SYT6Q5T7P8 510 aaPredicted RBP10.49□□□□□ -0.73
SDC1-206ENST00000482879 TMEM200AQ86VY9 491 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 PHC2Q8IXK0 858 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 OR5AS1Q8N127 324 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 FBXL14Q8N1E6 418 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 OR10AC1Q8NH08 325 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 MARVELD3Q96A59 401 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 PGLYRP3Q96LB9 341 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 PLK3Q9H4B4 646 aa10.49□□□□□ -0.73
SDC1-206ENST00000482879 PURGQ9UJV8 347 aaKnown RBP10.49□□□□□ -0.73
SDC1-206ENST00000482879 SPG11Q96JI7 2443 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 IGLV3-9A0A075B6K5 115 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 A0A1W2PPW3 197 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 LOC390937A0A1W2PQ73 354 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 CD300LBA8K4G0 201 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 TIMM8AO60220 97 aaPredicted RBP10.48□□□□□ -0.73
SDC1-206ENST00000482879 DHRS3O75911 302 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 IGHV3-13P01766 116 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 ZNF12P17014 697 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 KITLGP21583 273 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 CCL1P22362 96 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 SSTR2P30874 369 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 TTKP33981 857 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 LIPAP38571 399 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 DDOSTP39656 456 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 EVX1P49640 407 aa10.48□□□□□ -0.73
SDC1-206ENST00000482879 GP2P55259 537 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms