RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ZFP36P26651 326 aaKnown RBP16.71■□□□□ 0.27
MSH5-215ENST00000482280 DDOSTP39656 456 aa16.71■□□□□ 0.27
MSH5-215ENST00000482280 GATA4P43694 442 aa16.71■□□□□ 0.27
MSH5-215ENST00000482280 HNRNPA0Q13151 305 aaKnown RBP16.71■□□□□ 0.27
MSH5-215ENST00000482280 PLBD1Q6P4A8 553 aa16.71■□□□□ 0.27
MSH5-215ENST00000482280 OR8S1Q8NH09 359 aa16.71■□□□□ 0.27
MSH5-215ENST00000482280 ZFAND2BQ8WV99 257 aa16.71■□□□□ 0.27
MSH5-215ENST00000482280 NEIL1Q96FI4 390 aaPredicted RBP16.71■□□□□ 0.27
MSH5-215ENST00000482280 A6NLC8 198 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 ACTG1P63261 375 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 ZNF154Q13106 437 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 SNCBQ16143 134 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 C1orf229Q6ZS94 237 aaPredicted RBP16.7■□□□□ 0.26
MSH5-215ENST00000482280 USP43Q70EL4 1123 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 FTMTQ8N4E7 242 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 PLPP7Q8NBV4 271 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 OR52H1Q8NGJ2 320 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 DNAJC9Q8WXX5 260 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 ABHD6Q9BV23 337 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 PRRG3Q9BZD7 231 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 OR10A2Q9H208 303 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 TMEM165Q9HC07 324 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 TRIM36Q9NQ86 728 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 POMPQ9Y244 141 aa16.7■□□□□ 0.26
MSH5-215ENST00000482280 A0A1B0GWJ7 208 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 A8MXK9 166 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 F5H0A9 414 aaPredicted RBP16.69■□□□□ 0.26
MSH5-215ENST00000482280 PRODHO43272 600 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 FSTL3O95633 263 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 WNT2P09544 360 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 RBMXP38159 391 aaKnown RBP16.69■□□□□ 0.26
MSH5-215ENST00000482280 GNALP38405 381 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 SEC61A1P61619 476 aaKnown RBP16.69■□□□□ 0.26
MSH5-215ENST00000482280 MAB21L1Q13394 359 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 GFOD2Q3B7J2 385 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 ZNF404Q494X3 552 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 PRAMEF6Q5VXH4 476 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 RHOUQ7L0Q8 258 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 ZNF454Q8N9F8 522 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 BOLLQ8N9W6 283 aaKnown RBP16.69■□□□□ 0.26
MSH5-215ENST00000482280 OR56B2PQ8NGI1 322 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 Q8TCH9 128 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 THEM6Q8WUY1 208 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 ZMYND19Q96E35 227 aaPredicted RBP16.69■□□□□ 0.26
MSH5-215ENST00000482280 TMEM246Q9BRR3 403 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 MMADHCQ9H3L0 296 aaPredicted RBP16.69■□□□□ 0.26
MSH5-215ENST00000482280 NTN4Q9HB63 628 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 MMP26Q9NRE1 261 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 DNAJC27Q9NZQ0 273 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 RNF7Q9UBF6 113 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 CLN8Q9UBY8 286 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 POLR3KQ9Y2Y1 108 aaPredicted RBP16.69■□□□□ 0.26
MSH5-215ENST00000482280 INSIG2Q9Y5U4 225 aa16.69■□□□□ 0.26
MSH5-215ENST00000482280 hCG_1807616A0A1W2PRN6 198 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 FAM20BO75063 409 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 VENTXO95231 258 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 GRPP07492 148 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 LYNP07948 512 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 PSKH1P11801 424 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 ZNF12P17014 697 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 PRKACGP22612 351 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 PITPNBP48739 271 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 HILS1P60008 231 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 OR8B8Q15620 311 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 LINC01590Q5TEZ4 76 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 LRRN1Q6UXK5 716 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 DCDC5Q6ZRR9 648 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 FAM57BQ71RH2 274 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 TMEM179BQ7Z7N9 219 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 DEFB108BQ8NET1 73 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 RNF133Q8WVZ7 376 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 REEP6Q96HR9 211 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 PGAM5Q96HS1 289 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 SLC6A7Q99884 636 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 BRD7Q9NPI1 651 aa16.68■□□□□ 0.26
MSH5-215ENST00000482280 PAPOLBQ9NRJ5 636 aaKnown RBP16.68■□□□□ 0.26
MSH5-215ENST00000482280 TCRBV3S1A0A5B6 114 aa16.67■□□□□ 0.26
MSH5-215ENST00000482280 ZNF121P58317 390 aaPredicted RBP16.67■□□□□ 0.26
MSH5-215ENST00000482280 SLC35D3Q5M8T2 416 aa16.67■□□□□ 0.26
MSH5-215ENST00000482280 C12orf54Q6X4T0 127 aa16.67■□□□□ 0.26
MSH5-215ENST00000482280 CPOQ8IVL8 374 aa16.67■□□□□ 0.26
MSH5-215ENST00000482280 HS3ST5Q8IZT8 346 aa16.67■□□□□ 0.26
MSH5-215ENST00000482280 SLC7A6OSQ96CW6 309 aaPredicted RBP16.67■□□□□ 0.26
MSH5-215ENST00000482280 NRBF2Q96F24 287 aa16.67■□□□□ 0.26
MSH5-215ENST00000482280 RGCCQ9H4X1 137 aa16.67■□□□□ 0.26
MSH5-215ENST00000482280 OPN4Q9UHM6 478 aa16.67■□□□□ 0.26
MSH5-215ENST00000482280 NUP50Q9UKX7 468 aa16.67■□□□□ 0.26
MSH5-215ENST00000482280 TRAPPC2LH3BP13 241 aa16.66■□□□□ 0.26
MSH5-215ENST00000482280 ATP5HO75947 161 aa16.66■□□□□ 0.26
MSH5-215ENST00000482280 CDK5Q00535 292 aa16.66■□□□□ 0.26
MSH5-215ENST00000482280 MPPED2Q15777 294 aa16.66■□□□□ 0.26
MSH5-215ENST00000482280 SNAPC1Q16533 368 aa16.66■□□□□ 0.26
MSH5-215ENST00000482280 FAM201AQ5SY85 155 aa16.66■□□□□ 0.26
MSH5-215ENST00000482280 SLC16A9Q7RTY1 509 aa16.66■□□□□ 0.26
MSH5-215ENST00000482280 TIGD4Q8IY51 512 aa16.66■□□□□ 0.26
MSH5-215ENST00000482280 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.66■□□□□ 0.26
MSH5-215ENST00000482280 PAPD5Q8NDF8 572 aaKnown RBP16.66■□□□□ 0.26
MSH5-215ENST00000482280 CSNK2A3Q8NEV1 391 aa16.66■□□□□ 0.26
MSH5-215ENST00000482280 OTOSQ8NHW6 89 aa16.66■□□□□ 0.26
MSH5-215ENST00000482280 C22orf15Q8WYQ4 148 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms