RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 RNF212BA8MTL3 300 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 FSTL3O95633 263 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 CYB5R3P00387 301 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-213ENST00000482192 CFL1P23528 166 aaKnown RBP9.99□□□□□ -0.81
HMGN1-213ENST00000482192 CPT2P23786 658 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 RBMXP38159 391 aaKnown RBP9.99□□□□□ -0.81
HMGN1-213ENST00000482192 DDOSTP39656 456 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 NAA10P41227 235 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-213ENST00000482192 ZNF121P58317 390 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-213ENST00000482192 LCN2P80188 198 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 APOFQ13790 326 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 LCN1P1Q5VSP4 162 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 DCAF12L2Q5VW00 463 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 ASRGL1Q7L266 308 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 PRSS45Q7RTY3 260 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 KLBQ86Z14 1044 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 SPERTQ8NA61 448 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 PLPP7Q8NBV4 271 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 OR56B2PQ8NGI1 322 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 OR11L1Q8NGX0 322 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 Q8TCH9 128 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 THEM6Q8WUY1 208 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 OR10A2Q9H208 303 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 RGCCQ9H4X1 137 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 METTL17Q9H7H0 456 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-213ENST00000482192 FN3KRPQ9HA64 309 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 PATZ1Q9HBE1 687 aaKnown RBP9.99□□□□□ -0.81
HMGN1-213ENST00000482192 DNAJC27Q9NZQ0 273 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 METRNQ9UJH8 293 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 MALRD1Q5VYJ5 2156 aa9.99□□□□□ -0.81
HMGN1-213ENST00000482192 PPIAL4EA0A075B759 164 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 PPIAL4CA0A0B4J2A2 164 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-213ENST00000482192 ANKRD30BLA7E2S9 258 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 CEACAM18A8MTB9 384 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 PPIAL4DF5H284 164 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 MITFO75030 526 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-213ENST00000482192 PTBP3O95758 552 aaKnown RBP9.98□□□□□ -0.81
HMGN1-213ENST00000482192 PPIAL4FP0DN26 164 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 PSMA6P60900 246 aaKnown RBP9.98□□□□□ -0.81
HMGN1-213ENST00000482192 FAM3AP98173 230 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 MZT1Q08AG7 82 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 ESCO2Q56NI9 601 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 SLX4IPQ5VYV7 408 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 KDM4DQ6B0I6 523 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 FAM57BQ71RH2 274 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 SLC16A9Q7RTY1 509 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 FTMTQ8N4E7 242 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 RFLNBQ8N5W9 214 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 SPATA3Q8NHX4 192 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 LRTOMTQ8WZ04 291 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 SGK3Q96BR1 496 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 REEP6Q96HR9 211 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 TEAD3Q99594 435 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 TMPRSS13Q9BYE2 586 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 YIPF3Q9GZM5 350 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 NIPAL2Q9H841 368 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 C14orf119Q9NWQ9 140 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 LAMP5Q9UJQ1 280 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 KLHDC2Q9Y2U9 406 aa9.98□□□□□ -0.81
HMGN1-213ENST00000482192 hCG_38984A0A1B0GV85 526 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 ZAR1LA6NP61 321 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 A8MXK9 166 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 F5H0A9 414 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-213ENST00000482192 TCF21O43680 179 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 PRKYO43930 277 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 FAM20BO75063 409 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 ZNF205O95201 554 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 RPS2P15880 293 aaKnown RBP9.97□□□□□ -0.81
HMGN1-213ENST00000482192 ALOX5APP20292 161 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 ZFP36P26651 326 aaKnown RBP9.97□□□□□ -0.81
HMGN1-213ENST00000482192 PMELP40967 661 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 SEC61A1P61619 476 aaKnown RBP9.97□□□□□ -0.81
HMGN1-213ENST00000482192 MPPED2Q15777 294 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 SNCBQ16143 134 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 GFOD2Q3B7J2 385 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 ZNF404Q494X3 552 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 PRAMEF6Q5VXH4 476 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 LIPNQ5VXI9 398 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 KCTD18Q6PI47 426 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-213ENST00000482192 LRRN1Q6UXK5 716 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 CCDC121Q6ZUS5 278 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 KRT77Q7Z794 578 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 AMIGO2Q86SJ2 522 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 OR8S1Q8NH09 359 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 DVL3Q92997 716 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-213ENST00000482192 CENPNQ96H22 339 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-213ENST00000482192 PGAM5Q96HS1 289 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 C7orf69Q9H7B7 122 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 TMEM165Q9HC07 324 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 BRD7Q9NPI1 651 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 UFSP2Q9NUQ7 469 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 OR5V1Q9UGF6 321 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 LRCH1Q9Y2L9 728 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 POLR3KQ9Y2Y1 108 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-213ENST00000482192 PPIAL4AQ9Y536 164 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 TMEM14AQ9Y6G1 99 aa9.97□□□□□ -0.81
HMGN1-213ENST00000482192 LOC105371242A0A075B767 164 aa9.96□□□□□ -0.82
HMGN1-213ENST00000482192 CCDC182A6NF36 153 aa9.96□□□□□ -0.82
HMGN1-213ENST00000482192 SLC22A31A6NKX4 558 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms