RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 HDDC2Q7Z4H3 204 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.75□□□□□ -0.37
CHD3-211ENST00000481999 OR9K2Q8NGE7 335 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 ATG5Q9H1Y0 275 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 CSAG2Q9Y5P2 127 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 MYO7BQ6PIF6 2116 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 NPIPA2E9PIF3 369 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 NPIPA3F8WFD2 350 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 ITGB2P05107 769 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 FTH1P19P0C7X4 201 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 CXCL2P19875 107 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 FSTP19883 344 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 GUCA2AQ02747 115 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 SPOCK1Q08629 439 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 DTX1Q86Y01 620 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 OR52B4Q8NGK2 314 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 ZNF416Q9BWM5 594 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 SVILO95425 2214 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 TMEM272A0A1B0GTI8 110 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 DCDC2BA2VCK2 349 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 I3L521 148 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 AQP8O94778 261 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 IGHV3-9P01782 118 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 RRASP10301 218 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 M6PRP20645 277 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 SRD5A2P31213 254 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 HIST3H3Q16695 136 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 ABHD17BQ5VST6 288 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 CLEC1AQ8NC01 280 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 ADPRHL1Q8NDY3 354 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 OR4D10Q8NGI6 311 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 OR51S1Q8NGJ8 323 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 OR10D3Q8NH80 312 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 ABHD3Q8WU67 409 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 PNPLA2Q96AD5 504 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 ALKBH3Q96Q83 286 aaPredicted RBP12.74□□□□□ -0.37
CHD3-211ENST00000481999 RBM24Q9BX46 236 aaKnown RBP12.74□□□□□ -0.37
CHD3-211ENST00000481999 GPR87Q9BY21 358 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 FAM206AQ9NX38 181 aa12.74□□□□□ -0.37
CHD3-211ENST00000481999 MCRIP1C9JLW8 97 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 SULT1C2O00338 296 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 ZNHIT1O43257 154 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 TTRP02766 147 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 HTR2CP28335 458 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 PRSS12P56730 875 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 OR1C1Q15619 314 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 C3AR1Q16581 482 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 PIP4P1Q86T03 277 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 SULF2Q8IWU5 870 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 OR6M1Q8NGM8 313 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 OR13C3Q8NGS6 347 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 GPX8Q8TED1 209 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 SLC25A28Q96A46 364 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 DHRS9Q9BPW9 319 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 C1orf198Q9H425 327 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 OPN4Q9UHM6 478 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 MEGF11A6BM72 1044 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 ZSCAN5BA6NJL1 495 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 OR6C65A6NJZ3 312 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 C21orf140B9A014 251 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 RGS11O94810 467 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 HRGP04196 525 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 ACSM4P0C7M7 580 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 IGFBP3P17936 291 aaPredicted RBP12.73□□□□□ -0.37
CHD3-211ENST00000481999 MAGEA5P43359 124 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 EIF3IQ13347 325 aaKnown RBP12.73□□□□□ -0.37
CHD3-211ENST00000481999 OR10K2Q6IF99 312 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 STEAP1BQ6NZ63 245 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 C3P1Q6ZMU1 363 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 LRRC20Q8TCA0 184 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 SPACA5Q96QH8 159 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 SCPEP1Q9HB40 452 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 PNRC2Q9NPJ4 139 aaKnown RBP12.73□□□□□ -0.37
CHD3-211ENST00000481999 KIF25Q9UIL4 384 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 HHLA2Q9UM44 414 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 SLC5A6Q9Y289 635 aa12.73□□□□□ -0.37
CHD3-211ENST00000481999 ARGFXA6NJG6 315 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 HMSDA8MTL9 139 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 CD3DP04234 171 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 PATE4P0C8F1 98 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 CD37P11049 281 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 CSNK1A1P48729 337 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 CARD18P57730 90 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 SEC61A1P61619 476 aaKnown RBP12.72□□□□□ -0.37
CHD3-211ENST00000481999 GLYATL3Q5SZD4 288 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 TMPRSS7Q7RTY8 843 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 TMEM123Q8N131 208 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 OR2AK2Q8NG84 335 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 OR51E1Q8TCB6 317 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 PCNPQ8WW12 178 aaKnown RBP12.72□□□□□ -0.37
CHD3-211ENST00000481999 CYYR1Q96J86 154 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 ALX4Q9H161 411 aaPredicted RBP12.72□□□□□ -0.37
CHD3-211ENST00000481999 UPB1Q9UBR1 384 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 NUP50Q9UKX7 468 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 PCDHGA1Q9Y5H4 931 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 MEIS3P1A6NDR6 274 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 LPLP06858 475 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 ZNF17P17021 662 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 TAS2R19P59542 299 aa12.72□□□□□ -0.37
CHD3-211ENST00000481999 MPPED2Q15777 294 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms