RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 REEP1Q9H902 201 aa15.46■□□□□ 0.07
CLK1-211ENST00000481641 FN3KRPQ9HA64 309 aa15.46■□□□□ 0.07
CLK1-211ENST00000481641 RNF7Q9UBF6 113 aa15.46■□□□□ 0.07
CLK1-211ENST00000481641 CTSZQ9UBR2 303 aa15.46■□□□□ 0.07
CLK1-211ENST00000481641 C22orf46C9J442 243 aa15.45■□□□□ 0.06
CLK1-211ENST00000481641 GRPP07492 148 aa15.45■□□□□ 0.06
CLK1-211ENST00000481641 SLC25A1P53007 311 aa15.45■□□□□ 0.06
CLK1-211ENST00000481641 TRIM25Q14258 630 aaKnown RBP15.45■□□□□ 0.06
CLK1-211ENST00000481641 PCK2Q16822 640 aa15.45■□□□□ 0.06
CLK1-211ENST00000481641 IQCF1Q8N6M8 205 aa15.45■□□□□ 0.06
CLK1-211ENST00000481641 OR2T33Q8NG76 320 aa15.45■□□□□ 0.06
CLK1-211ENST00000481641 CLPTM1LQ96KA5 538 aa15.45■□□□□ 0.06
CLK1-211ENST00000481641 DGCR6LQ9BY27 220 aa15.45■□□□□ 0.06
CLK1-211ENST00000481641 SLC22A4Q9H015 551 aa15.45■□□□□ 0.06
CLK1-211ENST00000481641 C1orf123Q9NWV4 160 aa15.45■□□□□ 0.06
CLK1-211ENST00000481641 DHRS12A0PJE2 317 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 FAM183AA6NL82 134 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 TBX1O43435 398 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 GMDSO60547 372 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 PLATP00750 562 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 T-ENOLP0DO92 83 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 PSMB10P40306 273 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 FGF12P61328 243 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 POU4F2Q12837 409 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 EIF2B1Q14232 305 aaKnown RBP15.44■□□□□ 0.06
CLK1-211ENST00000481641 SLC9A3R2Q15599 337 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 LINC01590Q5TEZ4 76 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 BRD3OSQ6XYD6 125 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 OR10G2Q8NGC3 310 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 TECTBQ96PL2 329 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 RASSF4Q9H2L5 321 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 MRPL15Q9P015 296 aaKnown RBP15.44■□□□□ 0.06
CLK1-211ENST00000481641 BAIAP2Q9UQB8 552 aa15.44■□□□□ 0.06
CLK1-211ENST00000481641 ZNF878C9JN71 531 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 LGALS8O00214 317 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 PHYHO14832 338 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 SPRY1O43609 319 aaPredicted RBP15.43■□□□□ 0.06
CLK1-211ENST00000481641 PTBP3O95758 552 aaKnown RBP15.43■□□□□ 0.06
CLK1-211ENST00000481641 PPIAL4GP0DN37 164 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 CX3CR1P49238 355 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 FOXL1Q12952 345 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 OR8B8Q15620 311 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 FAM98BQ52LJ0 330 aaKnown RBP15.43■□□□□ 0.06
CLK1-211ENST00000481641 TEX30Q5JUR7 227 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 DPY19L4Q7Z388 723 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 ERI1Q8IV48 349 aaKnown RBP15.43■□□□□ 0.06
CLK1-211ENST00000481641 OTULINQ96BN8 352 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 CCDC124Q96CT7 223 aaKnown RBP15.43■□□□□ 0.06
CLK1-211ENST00000481641 ZMYND19Q96E35 227 aaPredicted RBP15.43■□□□□ 0.06
CLK1-211ENST00000481641 AMELYQ99218 206 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 MUC13Q9H3R2 512 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 PPP1R3EQ9H7J1 279 aa15.43■□□□□ 0.06
CLK1-211ENST00000481641 NOP16Q9Y3C1 178 aaKnown RBP15.43■□□□□ 0.06
CLK1-211ENST00000481641 A6NLC8 198 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 RIIAD1A6NNX1 92 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 TNFRSF13BO14836 293 aaPredicted RBP15.42■□□□□ 0.06
CLK1-211ENST00000481641 ADAM20O43506 726 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 IFNGP01579 166 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 GYPAP02724 150 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 ANXA2P07355 339 aaKnown RBP15.42■□□□□ 0.06
CLK1-211ENST00000481641 MTNR1AP48039 350 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 C9orf139Q6ZV77 190 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 TMEM179BQ7Z7N9 219 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 ARHGAP24Q8N264 748 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 OR6N2Q8NGY6 317 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 SGK3Q96BR1 496 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 FEVQ99581 238 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 SMURF1Q9HCE7 757 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 CMC2Q9NRP2 79 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 DNAJC27Q9NZQ0 273 aa15.42■□□□□ 0.06
CLK1-211ENST00000481641 IGHV3OR15-7A0A075B7D8 119 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 hCG_1807616A0A1W2PRN6 198 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 XRCC2O43543 280 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 FCN3O75636 299 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 SFTPBP07988 381 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 RNASE1P07998 156 aaKnown RBP15.41■□□□□ 0.06
CLK1-211ENST00000481641 ZNF3P17036 446 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 ELF3P78545 371 aaPredicted RBP15.41■□□□□ 0.06
CLK1-211ENST00000481641 FAM3AP98173 230 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 DEFB112Q30KQ8 113 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 RUSC1-AS1Q66K80 236 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 FAM57BQ71RH2 274 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 SLC16A9Q7RTY1 509 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 GCSAMQ8N6F7 178 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 SGMS2Q8NHU3 365 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 TEX47Q8TBZ9 253 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 GIPC3Q8TF64 312 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 SPSB4Q96A44 273 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 SLC25A28Q96A46 364 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 INTS14Q96SY0 518 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 PCGF1Q9BSM1 259 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 ABHD6Q9BV23 337 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 ZNF747Q9BV97 191 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 CHID1Q9BWS9 393 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 ZMAT3Q9HA38 289 aaKnown RBP15.41■□□□□ 0.06
CLK1-211ENST00000481641 BRD7Q9NPI1 651 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 ZNF319Q9P2F9 582 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 ERVK-18Q9QC07 812 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 MGAM2Q2M2H8 2515 aa15.41■□□□□ 0.06
CLK1-211ENST00000481641 OOEPA6NGQ2 149 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms