RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 DNM1P46Q6ZS02 220 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 SYS1Q8N2H4 156 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 ZNF649Q9BS31 505 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 PBOV1Q9GZY1 135 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 TPK1Q9H3S4 243 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 ERVK13-1Q9NX77 482 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 SNX5Q9Y5X3 404 aa16.82■□□□□ 0.28
LIME1-205ENST00000480139 EFCAB10A6NFE3 127 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 CD300LBA8K4G0 201 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 PNPP00491 289 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 IGLV3-1P01715 115 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 IGHV1-46P01743 117 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 CD55P08174 381 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 FAM3AP98173 230 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 Q6ZR03 302 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 GTF3AQ92664 365 aaKnown RBP16.81■□□□□ 0.28
LIME1-205ENST00000480139 SIGLEC11Q96RL6 698 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 ZNF184Q99676 751 aaPredicted RBP16.81■□□□□ 0.28
LIME1-205ENST00000480139 SLC30A2Q9BRI3 323 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 ALG8Q9BVK2 526 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 MSL2Q9HCI7 577 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 G6PC2Q9NQR9 355 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 ACOXLQ9NUZ1 547 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 GNG8Q9UK08 70 aa16.81■□□□□ 0.28
LIME1-205ENST00000480139 DIMT1Q9UNQ2 313 aaKnown RBP16.81■□□□□ 0.28
LIME1-205ENST00000480139 GGT3PA6NGU5 568 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 CSF3P09919 207 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 DSCR9P59020 149 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 MRPS11P82912 194 aaKnown RBP16.8■□□□□ 0.28
LIME1-205ENST00000480139 OR8B8Q15620 311 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 SNCBQ16143 134 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 TP53I3Q53FA7 332 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 C6orf141Q5SZD1 244 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 BCL2L15Q5TBC7 163 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 LHFPL3Q86UP9 236 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 ELMOD2Q8IZ81 293 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 OR5AS1Q8N127 324 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 OR13G1Q8NGZ3 307 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 SPRYD4Q8WW59 207 aaPredicted RBP16.8■□□□□ 0.28
LIME1-205ENST00000480139 RORBQ92753 470 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 GGHQ92820 318 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 TMEM80Q96HE8 168 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 SLC22A4Q9H015 551 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 FKBP14Q9NWM8 211 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 MRPL15Q9P015 296 aaKnown RBP16.8■□□□□ 0.28
LIME1-205ENST00000480139 PSORS1C1Q9UIG5 152 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 OR52A1Q9UKL2 312 aa16.8■□□□□ 0.28
LIME1-205ENST00000480139 CREBBPQ92793 2442 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 SPRY3O43610 288 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 SSX4O60224 188 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 RPP14O95059 124 aaKnown RBP16.79■□□□□ 0.28
LIME1-205ENST00000480139 TTRP02766 147 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 LIMS3P0CW19 117 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 LIMS4P0CW20 117 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 ATP6V1B1P15313 513 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 MAGEB1P43366 347 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 GSK3AP49840 483 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 OR12D2P58182 307 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 MRPL28Q13084 256 aaKnown RBP16.79■□□□□ 0.28
LIME1-205ENST00000480139 FDX2Q6P4F2 183 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 CATSPERDQ86XM0 798 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 BHLHE23Q8NDY6 225 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 BPIFB6Q8NFQ5 453 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 OR56B2PQ8NGI1 322 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 HAVCR2Q8TDQ0 301 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 RNF166Q96A37 237 aaPredicted RBP16.79■□□□□ 0.28
LIME1-205ENST00000480139 RHNO1Q9BSD3 238 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 TMEM100Q9NV29 134 aa16.79■□□□□ 0.28
LIME1-205ENST00000480139 EXOSC1Q9Y3B2 195 aaKnown RBP16.79■□□□□ 0.28
LIME1-205ENST00000480139 NOP16Q9Y3C1 178 aaKnown RBP16.79■□□□□ 0.28
LIME1-205ENST00000480139 AKAP9Q99996 3911 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 LOC390937A0A1W2PQ73 354 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 XPNPEP2O43895 674 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 LILRA1O75019 489 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 NCR1O76036 304 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 DAOP14920 347 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 TNFSF4P23510 183 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 PRSS12P56730 875 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 ST3GAL4Q11206 333 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 MED21Q13503 144 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 CLEC12BQ2HXU8 276 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 GFOD2Q3B7J2 385 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 CLEC2AQ6UVW9 174 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 FTMTQ8N4E7 242 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 CSNK2A3Q8NEV1 391 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 PELI1Q96FA3 418 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 ELMOD3Q96FG2 381 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 LYZL4Q96KX0 146 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 C4orf36Q96KX1 117 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 EGLN1Q9GZT9 426 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 DECR2Q9NUI1 292 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 IL19Q9UHD0 177 aa16.78■□□□□ 0.28
LIME1-205ENST00000480139 ITPR3Q14573 2671 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 J3QLW9 94 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 NDUFS8O00217 210 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 SLC1A7O00341 560 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 LY6HO94772 140 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 HPXP02790 462 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 CCDC159P0C7I6 412 aa16.77■□□□□ 0.28
LIME1-205ENST00000480139 ZNF19P17023 458 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms