RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 DUS3LQ96G46 650 aaKnown RBP19.64■□□□□ 0.73
C9orf3-215ENST00000478473 C19orf24Q9BVV8 132 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 SP140LQ9H930 580 aa19.64■□□□□ 0.73
C9orf3-215ENST00000478473 LOC105371242A0A075B767 164 aa19.63■□□□□ 0.73
C9orf3-215ENST00000478473 CYB5R3P00387 301 aaPredicted RBP19.63■□□□□ 0.73
C9orf3-215ENST00000478473 ZNF12P17014 697 aa19.63■□□□□ 0.73
C9orf3-215ENST00000478473 POU1F1P28069 291 aa19.63■□□□□ 0.73
C9orf3-215ENST00000478473 PAX2Q02962 417 aa19.63■□□□□ 0.73
C9orf3-215ENST00000478473 PLBD1Q6P4A8 553 aa19.63■□□□□ 0.73
C9orf3-215ENST00000478473 ZFAND2BQ8WV99 257 aa19.63■□□□□ 0.73
C9orf3-215ENST00000478473 DACT3Q96B18 629 aaPredicted RBP19.63■□□□□ 0.73
C9orf3-215ENST00000478473 AMELYQ99218 206 aa19.63■□□□□ 0.73
C9orf3-215ENST00000478473 C7orf69Q9H7B7 122 aa19.63■□□□□ 0.73
C9orf3-215ENST00000478473 GGT3PA6NGU5 568 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 TRAPPC2LH3BP13 241 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 SLC2A1P11166 492 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 CA6P23280 308 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 CX3CR1P49238 355 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 SEC61A1P61619 476 aaKnown RBP19.62■□□□□ 0.73
C9orf3-215ENST00000478473 CPOQ8IVL8 374 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 SEMA6DQ8NFY4 1073 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 OR52H1Q8NGJ2 320 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 NANPQ8TBE9 248 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 SGK3Q96BR1 496 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 TMEM246Q9BRR3 403 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 OR51V1Q9H2C8 321 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 MMP26Q9NRE1 261 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 MIOXQ9UGB7 285 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 PPIAL4AQ9Y536 164 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 INSIG2Q9Y5U4 225 aa19.62■□□□□ 0.73
C9orf3-215ENST00000478473 EPHA1P21709 976 aa19.61■□□□□ 0.73
C9orf3-215ENST00000478473 FAM3AP98173 230 aa19.61■□□□□ 0.73
C9orf3-215ENST00000478473 SRSF2Q01130 221 aaKnown RBP19.61■□□□□ 0.73
C9orf3-215ENST00000478473 OR8G1Q15617 311 aa19.61■□□□□ 0.73
C9orf3-215ENST00000478473 ESCO2Q56NI9 601 aa19.61■□□□□ 0.73
C9orf3-215ENST00000478473 OR56B2PQ8NGI1 322 aa19.61■□□□□ 0.73
C9orf3-215ENST00000478473 OR5K1Q8NHB7 308 aa19.61■□□□□ 0.73
C9orf3-215ENST00000478473 ZMYND19Q96E35 227 aaPredicted RBP19.61■□□□□ 0.73
C9orf3-215ENST00000478473 ADAT1Q9BUB4 502 aaKnown RBP19.61■□□□□ 0.73
C9orf3-215ENST00000478473 TEX12Q9BXU0 123 aa19.61■□□□□ 0.73
C9orf3-215ENST00000478473 PAPOLBQ9NRJ5 636 aaKnown RBP19.61■□□□□ 0.73
C9orf3-215ENST00000478473 TIPRLO75663 272 aa19.6■□□□□ 0.73
C9orf3-215ENST00000478473 CFL1P23528 166 aaKnown RBP19.6■□□□□ 0.73
C9orf3-215ENST00000478473 DAPP51397 102 aa19.6■□□□□ 0.73
C9orf3-215ENST00000478473 CRISP1P54107 249 aa19.6■□□□□ 0.73
C9orf3-215ENST00000478473 ESRRGP62508 458 aa19.6■□□□□ 0.73
C9orf3-215ENST00000478473 ZNF154Q13106 437 aa19.6■□□□□ 0.73
C9orf3-215ENST00000478473 MPPED2Q15777 294 aa19.6■□□□□ 0.73
C9orf3-215ENST00000478473 ATP6AP1Q15904 470 aa19.6■□□□□ 0.73
C9orf3-215ENST00000478473 SLC16A9Q7RTY1 509 aa19.6■□□□□ 0.73
C9orf3-215ENST00000478473 OR11L1Q8NGX0 322 aa19.6■□□□□ 0.73
C9orf3-215ENST00000478473 RGCCQ9H4X1 137 aa19.6■□□□□ 0.73
C9orf3-215ENST00000478473 hCG_38984A0A1B0GV85 526 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 FAM20BO75063 409 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 VENTXO95231 258 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 LYNP07948 512 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 PPIAL4GP0DN37 164 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 ADRA2CP18825 462 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 ALOX5APP20292 161 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 HSD11B1P28845 292 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 PSMB10P40306 273 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 ZNF121P58317 390 aaPredicted RBP19.59■□□□□ 0.73
C9orf3-215ENST00000478473 EFNB1P98172 346 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 PAX8Q06710 450 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 KLHL12Q53G59 568 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 TMEM236Q5W0B7 351 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 DCDC5Q6ZRR9 648 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 SPATC1Q76KD6 591 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 ZNF418Q8TF45 676 aaPredicted RBP19.59■□□□□ 0.73
C9orf3-215ENST00000478473 DVL3Q92997 716 aaPredicted RBP19.59■□□□□ 0.73
C9orf3-215ENST00000478473 OTULINQ96BN8 352 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 NEIL1Q96FI4 390 aaPredicted RBP19.59■□□□□ 0.73
C9orf3-215ENST00000478473 NIPAL2Q9H841 368 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 FN3KRPQ9HA64 309 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 ZNF319Q9P2F9 582 aa19.59■□□□□ 0.73
C9orf3-215ENST00000478473 IGHV3-64DA0A0J9YX35 117 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 TNFRSF13BO14836 293 aaPredicted RBP19.58■□□□□ 0.72
C9orf3-215ENST00000478473 SELENOFO60613 162 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 IRF2P14316 349 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 HILS1P60008 231 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 MZT1Q08AG7 82 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 PRAMEF6Q5VXH4 476 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 ZNF771Q7L3S4 317 aaPredicted RBP19.58■□□□□ 0.72
C9orf3-215ENST00000478473 KRT74Q7RTS7 529 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 BBS1Q8NFJ9 593 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 ITFG2Q969R8 447 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 REEP6Q96HR9 211 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 SSBP3Q9BWW4 388 aaPredicted RBP19.58■□□□□ 0.72
C9orf3-215ENST00000478473 OCEL1Q9H607 264 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 RNF7Q9UBF6 113 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 FBN3Q75N90 2809 aa19.58■□□□□ 0.72
C9orf3-215ENST00000478473 ANXA2P07355 339 aaKnown RBP19.57■□□□□ 0.72
C9orf3-215ENST00000478473 H2BFMP0C1H6 154 aa19.57■□□□□ 0.72
C9orf3-215ENST00000478473 RPS2P15880 293 aaKnown RBP19.57■□□□□ 0.72
C9orf3-215ENST00000478473 PTGES3Q15185 160 aaKnown RBP19.57■□□□□ 0.72
C9orf3-215ENST00000478473 OR8B8Q15620 311 aa19.57■□□□□ 0.72
C9orf3-215ENST00000478473 FAM201AQ5SY85 155 aa19.57■□□□□ 0.72
C9orf3-215ENST00000478473 DEGS2Q6QHC5 323 aa19.57■□□□□ 0.72
C9orf3-215ENST00000478473 PLEKHA8Q96JA3 519 aa19.57■□□□□ 0.72
C9orf3-215ENST00000478473 TEAD3Q99594 435 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms