RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, human

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RC3H2-208	ENST00000478216	DUX4L2	P0CJ85	424 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	DUX4L3	P0CJ86	424 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	DUX4L4	P0CJ87	422 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	DUX4L5	P0CJ88	424 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	DUX4L6	P0CJ89	424 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	DUX4L7	P0CJ90	424 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	TROVE2	P10155	538 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	ZNF26	P17031	533 aa	Predicted RBP	11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	GRK5	P34947	590 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	EFNB2	P52799	333 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	HIST1H3A	P68431	136 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	PCK2	Q16822	640 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	SLC36A3	Q495N2	470 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	LRRC10	Q5BKY1	277 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	FGD3	Q5JSP0	725 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	ZBTB37	Q5TC79	503 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	HIST2H3PS2	Q5TEC6	136 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	SLC18B1	Q6NT16	456 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	METAP1D	Q6UB28	335 aa	Predicted RBP	11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	PTCHD4	Q6ZW05	846 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	TMPRSS11F	Q6ZWK6	438 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	HIST2H3A	Q71DI3	136 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	FKBP9P1	Q75LS8	142 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	VTCN1	Q7Z7D3	282 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	CYP4Z1	Q86W10	505 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	GCSAM	Q8N6F7	178 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	FAM216B	Q8N7L0	139 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	OR2T12	Q8NG77	320 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	OR51G2	Q8NGK0	314 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	OR2AE1	Q8NHA4	323 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	LRRC29	Q8WV35	223 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	R3HDM4	Q96D70	268 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	ZNF799	Q96GE5	643 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	RSRC1	Q96IZ7	334 aa	Known RBP	11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	NKX3-1	Q99801	234 aa	Predicted RBP	11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	FAM234A	Q9H0X4	552 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	SRA1	Q9HD15	236 aa	Known RBP	11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216	DUX4	Q9UBX2	424 aa		11.65	□□□□□ -0.54
RC3H2-208	ENST00000478216		A0A1W2PQ09	198 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	NKX6-3	A6NJ46	265 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	BHLHE40	O14503	412 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	MRAS	O14807	208 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	PLXNB1	O43157	2135 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	FBXO24	O75426	580 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	MPIG6B	O95866	241 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	VSIG8	P0DPA2	414 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	CDKN2A	P42771	156 aa	Known RBP	11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	GMFB	P60983	142 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	ZNF92	Q03936	586 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	WDR38	Q5JTN6	314 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	NCR3LG1	Q68D85	454 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	PGBD2	Q6P3X8	592 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	PHF21A	Q96BD5	680 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	SSX3	Q99909	188 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	RAB18	Q9NP72	206 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	NRIP3	Q9NQ35	241 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	MRPL15	Q9P015	296 aa	Known RBP	11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	KAAG1	Q9UBP8	84 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216	RAB21	Q9UL25	225 aa		11.64	□□□□□ -0.55
RC3H2-208	ENST00000478216		A0A0G2JND7	137 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	ANKRD30BL	A7E2S9	258 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	DCTN6	O00399	190 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	FFAR1	O14842	300 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	PEX14	O75381	377 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	FCN3	O75636	299 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	PPP1R3D	O95685	299 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	PTBP3	O95758	552 aa	Known RBP	11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	POU1F1	P28069	291 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	ELF3	P78545	371 aa	Predicted RBP	11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	BLMH	Q13867	455 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	RFX4	Q33E94	735 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	SNAI3	Q3KNW1	292 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	IFI44L	Q53G44	452 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	GLYATL3	Q5SZD4	288 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	TEX36	Q5VZQ5	186 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	DPY19L2P2	Q6ZN68	376 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	TSEN54	Q7Z6J9	526 aa	Known RBP	11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	SLC26A10	Q8NG04	563 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	OR4F17	Q8NGA8	305 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	OR56B2P	Q8NGI1	322 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	PPP1R35	Q8TAP8	253 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	CFHR4	Q92496	578 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	ERMAP	Q96PL5	475 aa	Predicted RBP	11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	OR4F4	Q96R69	305 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	NPFFR1	Q9GZQ6	430 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	RPRD1B	Q9NQG5	326 aa	Known RBP	11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	PRPF19	Q9UMS4	504 aa	Known RBP	11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	SIGLEC7	Q9Y286	467 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	NBEAL2	Q6ZNJ1	2754 aa		11.63	□□□□□ -0.55
RC3H2-208	ENST00000478216	IGLV1-36	A0A0B4J1U3	117 aa		11.62	□□□□□ -0.55
RC3H2-208	ENST00000478216	UNC119B	A6NIH7	251 aa		11.62	□□□□□ -0.55
RC3H2-208	ENST00000478216	GSTA4	O15217	222 aa		11.62	□□□□□ -0.55
RC3H2-208	ENST00000478216	ANGPTL7	O43827	346 aa		11.62	□□□□□ -0.55
RC3H2-208	ENST00000478216	MUC1	P15941	1255 aa	Predicted RBP	11.62	□□□□□ -0.55
RC3H2-208	ENST00000478216	ZNF823	P16415	610 aa		11.62	□□□□□ -0.55
RC3H2-208	ENST00000478216	NOS3	P29474	1203 aa		11.62	□□□□□ -0.55
RC3H2-208	ENST00000478216	KIR2DS4	P43632	304 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms