RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ATG5Q9H1Y0 275 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 POFUT1Q9H488 388 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 HEXA-AS1Q9H8Q6 139 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 MYOZ1Q9NP98 299 aaPredicted RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 CHST11Q9NPF2 352 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 FANCFQ9NPI8 374 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SDHAF3Q9NRP4 125 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ALKBH4Q9NXW9 302 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PIPOXQ9P0Z9 390 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF69Q9UC07 566 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PISDQ9UG56 409 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ING1Q9UK53 422 aaPredicted RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR52A1Q9UKL2 312 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 GTF2A1LQ9UNN4 478 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PPIEQ9UNP9 301 aaKnown RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SLC22A13Q9Y226 551 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 LRP12Q9Y561 859 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 MAB21L2Q9Y586 359 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 IGLV3-32A0A0A0MS00 114 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 LOC107986453A0A1B0GWG9 222 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 A0A1W2PNV4 684 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 A0A1W2PQ72 361 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 LOC390937A0A1W2PQ73 354 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 RPS10-NUDT3A0A1W2PQS6 291 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PLSCR5A0PG75 271 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 OR6C65A6NJZ3 312 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 VSTM2BA6NLU5 285 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 FAM90A27PA6NNH2 459 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 C17orf51A8MQB3 221 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 HMSDA8MTL9 139 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 F5H5P2 479 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 MS4A18H0YCH9 400 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 L7N2F9 121 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 LDLRAD4O15165 306 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 SCGNO76038 276 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PMS2P2O95744 297 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ONECUT2O95948 504 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 H2BFMP0C1H6 154 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 GIMD1P0DJR0 217 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 VSIG10L2P0DP72 767 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PTHLHP12272 177 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 HSD11B1P28845 292 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 EFNB2P52799 333 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 HSF1Q00613 529 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 TLE3Q04726 772 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 MFGE8Q08431 387 aaPredicted RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PLA2G7Q13093 441 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 EXOSC2Q13868 293 aaKnown RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ZMYND11Q15326 602 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 OR7A5Q15622 319 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 GRK1Q15835 563 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ETFDHQ16134 617 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ODF4Q2M2E3 257 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 MS4A18Q3C1V0 323 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PHF19Q5T6S3 580 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ASPHD2Q6ICH7 369 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 RAB12Q6IQ22 244 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 FAAP20Q6NZ36 180 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 STEAP1BQ6NZ63 245 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PAPD4Q6PIY7 484 aaKnown RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 KLHL24Q6TFL4 600 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM205Q6UW68 189 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 KANSL1Q7Z3B3 1105 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 DCXRQ7Z4W1 244 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 CCDC28AQ8IWP9 274 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ELMOD2Q8IZ81 293 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 OR8H3Q8N146 312 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 GABRG1Q8N1C3 465 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 SLC25A45Q8N413 288 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 BMPERQ8N8U9 685 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 CLEC1AQ8NC01 280 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 OR2AK2Q8NG84 335 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 OR10H5Q8NGA6 315 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 SLC22A8Q8TCC7 542 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ST7LQ8TDW4 575 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 RNF133Q8WVZ7 376 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PNPLA2Q96AD5 504 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 DNAJA3Q96EY1 480 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ELMOD3Q96FG2 381 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 SLC25A44Q96H78 314 aaPredicted RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 MRGPRX4Q96LA9 322 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 C16orf92Q96LL3 132 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 C5orf34Q96MH7 638 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 FOXN4Q96NZ1 517 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 RBP7Q96R05 134 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 CMKLR1Q99788 373 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 SLC25A21Q9BQT8 299 aaPredicted RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 NUDT22Q9BRQ3 303 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 EDEM2Q9BV94 578 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 CHIAQ9BZP6 476 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 OR11A1Q9GZK7 315 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ALX4Q9H161 411 aaPredicted RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 MOB1AQ9H8S9 216 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 APMAPQ9HDC9 416 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 G6PC2Q9NQR9 355 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PRMT8Q9NR22 394 aaPredicted RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 SERINC1Q9NRX5 453 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms