RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 F5H5K5 113 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 J3QRE1 110 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 APOL3O95236 402 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 CDK1P06493 297 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 ACSM4P0C7M7 580 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 SELENOVP59797 346 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 PCK2Q16822 640 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 OR2T2Q6IF00 324 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 SPATC1Q76KD6 591 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 PRSS48Q7RTY5 328 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 SLC35F2Q8IXU6 374 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 ACBD7Q8N6N7 88 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 CLDND2Q8NHS1 167 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 SNX33Q8WV41 574 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 AMELYQ99218 206 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 COQ7Q99807 217 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 JAM3Q9BX67 310 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 CHODLQ9H9P2 273 aa14.97□□□□□ -0.01
PTPN7-209ENST00000477554 PAK1IP1Q9NWT1 392 aaPredicted RBP14.97□□□□□ -0.01
PTPN7-209ENST00000477554 CHCHD3Q9NX63 227 aaKnown RBP14.97□□□□□ -0.01
PTPN7-209ENST00000477554 FBXO9Q9UK97 447 aaPredicted RBP14.97□□□□□ -0.01
PTPN7-209ENST00000477554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.96□□□□□ -0.013e-6■■□□□ 11.8
PTPN7-209ENST00000477554 IGHV3-64DA0A0J9YX35 117 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 FAM157AC9JC47 383 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 H0YL77 283 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 PHYHO14832 338 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 TIMM8AO60220 97 aaPredicted RBP14.96□□□□□ -0.01
PTPN7-209ENST00000477554 IGHA1P01876 353 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 LYNP07948 512 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 MYL12AP19105 171 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 ACHEP22303 614 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 CYB5R2Q6BCY4 276 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 DPY19L4Q7Z388 723 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 ZNF454Q8N9F8 522 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 OR10H4Q8NGA5 316 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 MRPL48Q96GC5 212 aaKnown RBP14.96□□□□□ -0.01
PTPN7-209ENST00000477554 HDHD2Q9H0R4 259 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 LAMP5Q9UJQ1 280 aa14.96□□□□□ -0.01
PTPN7-209ENST00000477554 EXOSC1Q9Y3B2 195 aaKnown RBP14.96□□□□□ -0.01
PTPN7-209ENST00000477554 LOC100289279A0A1B0GTE1 492 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 DAPL1A0PJW8 107 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 ZNF670-ZNF695F2Z2N8 137 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 PPIHO43447 177 aaKnown RBP14.95□□□□□ -0.02
PTPN7-209ENST00000477554 RPSAP08865 295 aaKnown RBP14.95□□□□□ -0.02
PTPN7-209ENST00000477554 SPARCP09486 303 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 SELEP16581 610 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 GPR6P46095 362 aaPredicted RBP14.95□□□□□ -0.02
PTPN7-209ENST00000477554 MVKQ03426 396 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 SNAI3Q3KNW1 292 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 RNLSQ5VYX0 342 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 COLCA1Q6ZS62 124 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 DCXRQ7Z4W1 244 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 BHLHE23Q8NDY6 225 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 TSPAN14Q8NG11 270 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 OR2AJ1Q8NGZ0 328 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 OTOSQ8NHW6 89 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 HAVCR1Q96D42 359 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 ATF6BQ99941 703 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 CCDC90BQ9GZT6 254 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 SAP30LQ9HAJ7 183 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 ERVK-18Q9QC07 812 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 SNX5Q9Y5X3 404 aa14.95□□□□□ -0.02
PTPN7-209ENST00000477554 DYSFO75923 2080 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 A0A087WXM4 84 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 IGHV1-69-2A0A0G2JMI3 117 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 TPD52L2O43399 206 aaKnown RBP14.94□□□□□ -0.02
PTPN7-209ENST00000477554 SLC2A1P11166 492 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 KITLGP21583 273 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 C21orf33P30042 268 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-209ENST00000477554 CRYBB2P43320 205 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 HOXA4Q00056 320 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-209ENST00000477554 ZNF773Q6PK81 442 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 OR10AD1Q8NGE0 317 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 ST7LQ8TDW4 575 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 ASB17Q8WXJ9 295 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 SIGLEC11Q96RL6 698 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 C1QTNF5Q9BXJ0 243 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 CDCA4Q9BXL8 241 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 LPAR2Q9HBW0 351 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 DECR2Q9NUI1 292 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 NKIRAS2Q9NYR9 191 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 MXRA5Q9NR99 2828 aa14.94□□□□□ -0.02
PTPN7-209ENST00000477554 A0A1W2PQL4 384 aaPredicted RBP14.93□□□□□ -0.02
PTPN7-209ENST00000477554 MLNRO43193 412 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 TGFAP01135 160 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 ALOX5APP20292 161 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 HCCSP53701 268 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 LMO4P61968 165 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 SVOPQ8N4V2 548 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 OR2Z1Q8NG97 314 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 OR2AE1Q8NHA4 323 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 THEM6Q8WUY1 208 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 CCL17Q92583 94 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 SGCDQ92629 289 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 TBX5Q99593 518 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 ERVK13-1Q9NX77 482 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 ATPIF1Q9UII2 106 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 GPR160Q9UJ42 338 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 ERGIC3Q9Y282 383 aa14.93□□□□□ -0.02
PTPN7-209ENST00000477554 ARHGAP32A7KAX9 2087 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms