RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 THAP5Q7Z6K1 395 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 PEG10Q86TG7 708 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 FTMTQ8N4E7 242 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 APH1BQ8WW43 257 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 RAB1CQ92928 201 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 CNN2Q99439 309 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 SMR3AQ99954 134 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 POFUT1Q9H488 388 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 ZNF275Q9NSD4 429 aaPredicted RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 TMEM100Q9NV29 134 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 MRPS18AQ9NVS2 196 aaKnown RBP10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 CLN6Q9NWW5 311 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 PTTG3PQ9NZH4 202 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 LAMP5Q9UJQ1 280 aa10.49□□□□□ -0.73
CLCNKA-205ENST00000477360 ZFHX3Q15911 3703 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 CD300LBA8K4G0 201 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 TPD52L2O43399 206 aaKnown RBP10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 CLIC3O95833 236 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 H2BFMP0C1H6 154 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 PCMT1P22061 227 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 RPS27P42677 84 aaKnown RBP10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 MMP16P51512 607 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 PSMA6P60900 246 aaKnown RBP10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 CXCR4P61073 352 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 EGR3Q06889 387 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 CARTPTQ16568 116 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 OR2T2Q6IF00 324 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 ZNF283Q8N7M2 679 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 YIPF5Q969M3 257 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 MROQ9BYG7 248 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 OR10A2Q9H208 303 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 Q9H521 79 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 MSL2Q9HCI7 577 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 ABCB9Q9NP78 766 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 PLCXD1Q9NUJ7 323 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 DNAJC27Q9NZQ0 273 aa10.48□□□□□ -0.73
CLCNKA-205ENST00000477360 A0A0U1RQV5 110 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 A8MV72 311 aaPredicted RBP10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 SELENOFO60613 162 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 ENTPD6O75354 484 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 IGHV4-31P0DP07 118 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 ATP6V1B1P15313 513 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 CD200P41217 278 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 CX3CR1P49238 355 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 PRKXP51817 358 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 CSNK2BP67870 215 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 ZNF92Q03936 586 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 DBPQ10586 325 aaPredicted RBP10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 HLXQ14774 488 aaPredicted RBP10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 TSTQ16762 297 aaKnown RBP10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 SNAI3Q3KNW1 292 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 ALKBH6Q3KRA9 238 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 TMEM155Q4W5P6 130 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 BCDIN3DQ7Z5W3 292 aaKnown RBP10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 NAA40Q86UY6 237 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 ZNF679Q8IYX0 411 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 CSNK2A3Q8NEV1 391 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 OR2Z1Q8NG97 314 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 THEM6Q8WUY1 208 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 SPRYD4Q8WW59 207 aaPredicted RBP10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 RAB39BQ96DA2 213 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 OR8B4Q96RC9 309 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 MYCBPQ99417 103 aaPredicted RBP10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 MOB1AQ9H8S9 216 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 TMEM106BQ9NUM4 274 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 LPAR3Q9UBY5 353 aa10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 FN1P02751 2386 aaKnown RBP10.47□□□□□ -0.73
CLCNKA-205ENST00000477360 LRRC30A6NM36 301 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 B4DSR2 109 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 PPIHO43447 177 aaKnown RBP10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 SBK2P0C263 348 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 OR2T7P0C7T2 308 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 DBTP11182 482 aaKnown RBP10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 MTNR1AP48039 350 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 ZNF121P58317 390 aaPredicted RBP10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 ZNF91Q05481 1191 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 OR8B8Q15620 311 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 GLYATL3Q5SZD4 288 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 LAIR2Q6ISS4 152 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 KRT77Q7Z794 578 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 LINC01356Q8N9X3 169 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 OR2T27Q8NH04 317 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 CNIH3Q8TBE1 160 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 Q8TCH9 128 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 MEGF10Q96KG7 1140 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 OR2V2Q96R30 315 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 AMELYQ99218 206 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 ADGRL4Q9HBW9 690 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 GCM1Q9NP62 436 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 CDC42EP3Q9UKI2 254 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 PPP1R3CQ9UQK1 317 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 EXOGQ9Y2C4 368 aaKnown RBP10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 RPL36Q9Y3U8 105 aaKnown RBP10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 LRRC42Q9Y546 428 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 PCDHGB1Q9Y5G3 927 aa10.46□□□□□ -0.73
CLCNKA-205ENST00000477360 CHD3Q12873 2000 aaKnown RBP10.46□□□□□ -0.74
CLCNKA-205ENST00000477360 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.46□□□□□ -0.74
CLCNKA-205ENST00000477360 CR1P17927 2039 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms