RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 RGS6P49758 472 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 CXCL6P80162 114 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 PAX8Q06710 450 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF763Q0D2J5 394 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ZNHIT3Q15649 155 aaPredicted RBP3.21□□□□□ -1.9
VPS13D-207ENST00000476169 KYAT1Q16773 422 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 EXOC3L4Q17RC7 722 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 BSXQ3C1V8 233 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 FHL5Q5TD97 284 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ZC2HC1BQ5TFG8 222 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 OR2T5Q6IEZ7 315 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF613Q6PF04 617 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 PAGE2Q7Z2X7 111 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 RAB43Q86YS6 212 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 SLC30A8Q8IWU4 369 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ATPAF2Q8N5M1 289 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 CHST4Q8NCG5 386 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 CSNK1G2-AS1Q8NCQ2 148 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 OR8G5Q8NG78 346 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 OR51G1Q8NGK1 321 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 OR1N2Q8NGR9 330 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 OR2T29Q8NH02 315 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 SFXN5Q8TD22 340 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ZFP90Q8TF47 636 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 TMEM234Q8WY98 164 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF681Q96N22 645 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 RANBP9Q96S59 729 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 GABARAPL3Q9BY60 117 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 KRTAP17-1Q9BYP8 105 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF442Q9H7R0 627 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 PANK3Q9H999 370 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 UGT1A7Q9HAW7 530 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 UGT1A8Q9HAW9 530 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 FBXO8Q9NRD0 319 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 IMP3Q9NV31 184 aaKnown RBP3.21□□□□□ -1.9
VPS13D-207ENST00000476169 C1orf109Q9NX04 203 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 CD274Q9NZQ7 290 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF629Q9UEG4 869 aaPredicted RBP3.21□□□□□ -1.9
VPS13D-207ENST00000476169 CYB5R1Q9UHQ9 305 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 NAGKQ9UJ70 344 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 CFL2Q9Y281 166 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 MOB4Q9Y3A3 225 aa3.21□□□□□ -1.9
VPS13D-207ENST00000476169 MAPK8IP3Q9UPT6 1336 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 STRCQ7RTU9 1775 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 PIK3C2GO75747 1445 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 FAM135BQ49AJ0 1406 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 NEXMIFQ5QGS0 1516 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 CLTCL1P53675 1640 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 IGLV8-61A0A075B6I0 122 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 IGHV3OR16-10A0A075B7F0 116 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 A6NDN8 102 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 H0YHG0 523 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 PLPP3O14495 311 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 ZW10O43264 779 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 UTS2O95399 124 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 TIMP1P01033 207 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 GIPP09681 153 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-207ENST00000476169 PGA5P0DJD9 388 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 OR5H8P0DN80 308 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 GDF1P27539 372 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 GNRHRP30968 328 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 PRKAR2BP31323 418 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 S100A5P33763 92 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 HRH1P35367 487 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF121P58317 390 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-207ENST00000476169 PRKCDQ05655 676 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 TCP10Q12799 353 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 GNA13Q14344 377 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 KIAA0087Q14695 138 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 RBM48Q5RL73 367 aaKnown RBP3.2□□□□□ -1.9
VPS13D-207ENST00000476169 IDNKQ5T6J7 187 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 FAM27D1Q5T7N8 215 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 ANKRD22Q5VYY1 191 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 MFSD14CQ5VZR4 134 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 DCXRQ7Z4W1 244 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 FBXO16Q8IX29 292 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-207ENST00000476169 KRT222Q8N1A0 295 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 CA13Q8N1Q1 262 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 CCDC54Q8NEL0 328 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 RNASEH2CQ8TDP1 164 aaKnown RBP3.2□□□□□ -1.9
VPS13D-207ENST00000476169 FAM151AQ8WW52 585 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 SGTBQ96EQ0 304 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 FCRL1Q96LA6 429 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 SMIM14Q96QK8 99 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF184Q99676 751 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-207ENST00000476169 GABRG3Q99928 467 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 OSBPL11Q9BXB4 747 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 SLC25A22Q9H936 323 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 ACOT13Q9NPJ3 140 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 NLE1Q9NVX2 485 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-207ENST00000476169 IL20Q9NYY1 176 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 ZNF107Q9UII5 783 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-207ENST00000476169 KLF12Q9Y4X4 402 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 OR51B2Q9Y5P1 312 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 MRPS18BQ9Y676 258 aaKnown RBP3.2□□□□□ -1.9
VPS13D-207ENST00000476169 ABCC11Q96J66 1382 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 IQSEC2Q5JU85 1478 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 NRXN1Q9ULB1 1477 aa3.2□□□□□ -1.9
VPS13D-207ENST00000476169 MROH2AA6NES4 1674 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms