RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ARR3P36575 388 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 GDI2P50395 445 aaKnown RBP13.47□□□□□ -0.25
CPSF3-203ENST00000475482 CCR9P51686 369 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 GRB2P62993 217 aaKnown RBP13.47□□□□□ -0.25
CPSF3-203ENST00000475482 HGFACQ04756 655 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 SCRN3Q0VDG4 424 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 FDX2Q6P4F2 183 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 LRRN1Q6UXK5 716 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 USP43Q70EL4 1123 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 DPPA2Q7Z7J5 298 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 MYPOPQ86VE0 399 aaPredicted RBP13.47□□□□□ -0.25
CPSF3-203ENST00000475482 SLC22A24Q8N4F4 322 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 ZFP41Q8N8Y5 198 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 NUP37Q8NFH4 326 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 COMMD4Q9H0A8 199 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 OR51E2Q9H255 320 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 CA10Q9NS85 328 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 CENPMQ9NSP4 180 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 LRP12Q9Y561 859 aa13.47□□□□□ -0.25
CPSF3-203ENST00000475482 TMEM212A6NML5 194 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 PSMD9O00233 223 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 SSX4O60224 188 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 RGS9O75916 674 aaPredicted RBP13.46□□□□□ -0.25
CPSF3-203ENST00000475482 RPP14O95059 124 aaKnown RBP13.46□□□□□ -0.25
CPSF3-203ENST00000475482 CELA3BP08861 270 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 HSD11B1P28845 292 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 FGF9P31371 208 aaPredicted RBP13.46□□□□□ -0.25
CPSF3-203ENST00000475482 OPRL1P41146 370 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 DSCR9P59020 149 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 SLC3A1Q07837 685 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 ECH1Q13011 328 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 ALKBH1Q13686 389 aaKnown RBP13.46□□□□□ -0.25
CPSF3-203ENST00000475482 RAB35Q15286 201 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 EFNB3Q15768 340 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 ADIPOQQ15848 244 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 CD200R1LQ6Q8B3 271 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 CORO6Q6QEF8 472 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 ZNF813Q6ZN06 617 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 SLC16A14Q7RTX9 510 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 PHYHIPQ92561 330 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 TMED9Q9BVK6 235 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 ZNF224Q9NZL3 707 aa13.46□□□□□ -0.25
CPSF3-203ENST00000475482 SF3B6Q9Y3B4 125 aaKnown RBP13.46□□□□□ -0.25
CPSF3-203ENST00000475482 IGHV2OR16-5A0A0B4J2B6 119 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 E9PI62 339 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 MAGEB4O15481 346 aaPredicted RBP13.45□□□□□ -0.26
CPSF3-203ENST00000475482 PSKH1P11801 424 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 BMP4P12644 408 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 B4GALT1P15291 398 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 NR4A1P22736 598 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 SERPINF1P36955 418 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 CRYBB2P43320 205 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 SERPINB10P48595 397 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 EFNA4P52798 201 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 VBP1P61758 197 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 LSM3P62310 102 aaKnown RBP13.45□□□□□ -0.26
CPSF3-203ENST00000475482 RPS25P62851 125 aaKnown RBP13.45□□□□□ -0.26
CPSF3-203ENST00000475482 DOC2BQ14184 412 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 ENDOGQ14249 297 aaKnown RBP13.45□□□□□ -0.26
CPSF3-203ENST00000475482 SLC36A2Q495M3 483 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 YIF1BQ5BJH7 314 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 MDP1Q86V88 176 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 LRRC18Q8N456 261 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 MAPK1IP1LQ8NDC0 245 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 IL17RDQ8NFM7 739 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 OR2G2Q8NGZ5 317 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 OR5AK2Q8NH90 309 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 RPS4Y2Q8TD47 263 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 GHSRQ92847 366 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 TMEM203Q969S6 136 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 MAP6Q96JE9 813 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 KCTD7Q96MP8 289 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 AMELYQ99218 206 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 HDHD2Q9H0R4 259 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 PLK3Q9H4B4 646 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF442Q9H7R0 627 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 MOB1AQ9H8S9 216 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 NOX3Q9HBY0 568 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF281Q9Y2X9 895 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 TIMM10BQ9Y5J6 103 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 R4GMQ9 66 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 PMF1-BGLAPU3KQ54 211 aa13.45□□□□□ -0.26
CPSF3-203ENST00000475482 IGHV4-30-2A0A087WSY4 118 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 ACOD1A6NK06 481 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 PRR32B1ATL7 298 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 B9A039 149 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 LOC110117498-PIK3R3F6TDL0 507 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 GPX5O75715 221 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 GATBO75879 557 aaKnown RBP13.44□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF14P17017 642 aaPredicted RBP13.44□□□□□ -0.26
CPSF3-203ENST00000475482 MAPK3P27361 379 aaPredicted RBP13.44□□□□□ -0.26
CPSF3-203ENST00000475482 PSMB10P40306 273 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 MMP16P51512 607 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 IDH3GP51553 393 aaPredicted RBP13.44□□□□□ -0.26
CPSF3-203ENST00000475482 NCS1P62166 190 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 HIST1H3AP68431 136 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 ELFN2Q5R3F8 820 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 HIST2H3PS2Q5TEC6 136 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 OTPQ5XKR4 325 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 CFAP77Q6ZQR2 320 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms