RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 ZNF101Q8IZC7 436 aa11.77□□□□□ -0.53
ATG9A-220ENST00000475339 PPP1R14AQ96A00 147 aa11.77□□□□□ -0.53
ATG9A-220ENST00000475339 COQ7Q99807 217 aa11.77□□□□□ -0.53
ATG9A-220ENST00000475339 GABARAPL1Q9H0R8 117 aa11.77□□□□□ -0.53
ATG9A-220ENST00000475339 OR51V1Q9H2C8 321 aa11.77□□□□□ -0.53
ATG9A-220ENST00000475339 SLCO1C1Q9NYB5 712 aa11.77□□□□□ -0.53
ATG9A-220ENST00000475339 ATPIF1Q9UII2 106 aa11.77□□□□□ -0.53
ATG9A-220ENST00000475339 DNAH3Q8TD57 4116 aa11.77□□□□□ -0.53
ATG9A-220ENST00000475339 FAM183AA6NL82 134 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 SURF4O15260 269 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 TPD52L2O43399 206 aaKnown RBP11.76□□□□□ -0.53
ATG9A-220ENST00000475339 CLPTM1O96005 669 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 PLATP00750 562 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 SPARCP09486 303 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 CRISP1P54107 249 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 ESRRGP62508 458 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 ECH1Q13011 328 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 MOGQ16653 247 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 PCGF3Q3KNV8 242 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 ZNF718Q3SXZ3 478 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 CFAP77Q6ZQR2 320 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 SLC25A40Q8TBP6 338 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 CCL17Q92583 94 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 COG8Q96MW5 612 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 DCLRE1CQ96SD1 692 aaKnown RBP11.76□□□□□ -0.53
ATG9A-220ENST00000475339 DDOQ99489 341 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 NMNAT2Q9BZQ4 307 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 PRDM13Q9H4Q3 707 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 MED20Q9H944 212 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 SLC25A19Q9HC21 320 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 MRPL22Q9NWU5 206 aaKnown RBP11.76□□□□□ -0.53
ATG9A-220ENST00000475339 CYB5R1Q9UHQ9 305 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 OAZ3Q9UMX2 235 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 COMMD3-BMI1R4GMX3 469 aa11.76□□□□□ -0.53
ATG9A-220ENST00000475339 DYNC2H1Q8NCM8 4307 aaKnown RBP11.76□□□□□ -0.53
ATG9A-220ENST00000475339 H0YL77 283 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 H3BSA7 217 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 MITFO75030 526 aaPredicted RBP11.75□□□□□ -0.53
ATG9A-220ENST00000475339 CLUP10909 449 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 ZNF250P15622 560 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 GSTT1P30711 240 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 CD80P33681 288 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 GGT2P36268 569 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 RGS6P49758 472 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 ENTPD1P49961 510 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 SEC61A1P61619 476 aaKnown RBP11.75□□□□□ -0.53
ATG9A-220ENST00000475339 RPS7P62081 194 aaKnown RBP11.75□□□□□ -0.53
ATG9A-220ENST00000475339 CDK5Q00535 292 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 COL10A1Q03692 680 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 PAX8Q06710 450 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 SNAPC1Q16533 368 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 TSTQ16762 297 aaKnown RBP11.75□□□□□ -0.53
ATG9A-220ENST00000475339 KLHL12Q53G59 568 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 TMEM236Q5W0B7 351 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 PLBD1Q6P4A8 553 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 LYPD4Q6UWN0 246 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 BRD3OSQ6XYD6 125 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 IPCEF1Q8WWN9 437 aaPredicted RBP11.75□□□□□ -0.53
ATG9A-220ENST00000475339 SLC7A6Q92536 515 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 STMN2Q93045 179 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 INTS14Q96SY0 518 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 ATF6BQ99941 703 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 OR2J1Q9GZK6 312 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 DECR2Q9NUI1 292 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 TBCCD1Q9NVR7 557 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 TVP23BQ9NYZ1 205 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 POLR3KQ9Y2Y1 108 aaPredicted RBP11.75□□□□□ -0.53
ATG9A-220ENST00000475339 ORC6Q9Y5N6 252 aa11.75□□□□□ -0.53
ATG9A-220ENST00000475339 TRAV40A0A0B4J280 105 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 PLSCR5A0PG75 271 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 F5H5K5 113 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 ICMTO60725 284 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 GLCEO94923 617 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 DBHP09172 617 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 HIST1H3AP68431 136 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 HNRNPA0Q13151 305 aaKnown RBP11.74□□□□□ -0.53
ATG9A-220ENST00000475339 TAF13Q15543 124 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 HIST2H3PS2Q5TEC6 136 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 Q6YL49 198 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 HIST2H3AQ71DI3 136 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 ERI1Q8IV48 349 aaKnown RBP11.74□□□□□ -0.53
ATG9A-220ENST00000475339 ZNF511Q8NB15 262 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 OR5L1Q8NGL2 311 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 OR6N2Q8NGY6 317 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 KLF14Q8TD94 323 aaPredicted RBP11.74□□□□□ -0.53
ATG9A-220ENST00000475339 ZNRF4Q8WWF5 429 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 SPTSSAQ969W0 71 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 MARS2Q96GW9 593 aaKnown RBP11.74□□□□□ -0.53
ATG9A-220ENST00000475339 CIB1Q99828 191 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 COPS4Q9BT78 406 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 OSBPL10Q9BXB5 764 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 RIBC2Q9H4K1 309 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 WDR76Q9H967 626 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 SAP30LQ9HAJ7 183 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 NKIRAS2Q9NYR9 191 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 TET2Q6N021 2002 aaPredicted RBP11.74□□□□□ -0.53
ATG9A-220ENST00000475339 DOCK11Q5JSL3 2073 aa11.74□□□□□ -0.53
ATG9A-220ENST00000475339 IGLV3-9A0A075B6K5 115 aa11.73□□□□□ -0.53
ATG9A-220ENST00000475339 H3BNX3 289 aa11.73□□□□□ -0.53
ATG9A-220ENST00000475339 J3QW42 95 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms