RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 WARS2Q9UGM6 360 aaKnown RBP13.9□□□□□ -0.18
ATG4B-216ENST00000475195 COPS3Q9UNS2 423 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 PPP1R3CQ9UQK1 317 aa13.9□□□□□ -0.18
ATG4B-216ENST00000475195 JMJD1CQ15652 2540 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 B4DSR2 109 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 HLA-DPB1P04440 258 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 ANXA2P07355 339 aaKnown RBP13.89□□□□□ -0.19
ATG4B-216ENST00000475195 SBK2P0C263 348 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 ZNF16P17020 682 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-216ENST00000475195 CFL1P23528 166 aaKnown RBP13.89□□□□□ -0.19
ATG4B-216ENST00000475195 HTR1FP30939 366 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 CD200P41217 278 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 CDC42P60953 191 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 MVKQ03426 396 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 FAM57BQ71RH2 274 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 KLBQ86Z14 1044 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 ZNF679Q8IYX0 411 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 PLPP7Q8NBV4 271 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 OR10AD1Q8NGE0 317 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 SPRYD4Q8WW59 207 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-216ENST00000475195 ITFG2Q969R8 447 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 EME1Q96AY2 570 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 OR8B4Q96RC9 309 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 CNN2Q99439 309 aaKnown RBP13.89□□□□□ -0.19
ATG4B-216ENST00000475195 MROQ9BYG7 248 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 CLN6Q9NWW5 311 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 DCAF16Q9NXF7 216 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 DNAJC27Q9NZQ0 273 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 NOP16Q9Y3C1 178 aaKnown RBP13.89□□□□□ -0.19
ATG4B-216ENST00000475195 LRP12Q9Y561 859 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 NPTNQ9Y639 398 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 MXRA5Q9NR99 2828 aa13.89□□□□□ -0.19
ATG4B-216ENST00000475195 hCG_38984A0A1B0GV85 526 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 GGT3PA6NGU5 568 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 PRR32B1ATL7 298 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 FAM157AC9JC47 383 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 F5H5P2 479 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 TMEM178BH3BS89 294 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 IGHV2-70P01814 119 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 MRPL3P09001 348 aaKnown RBP13.88□□□□□ -0.19
ATG4B-216ENST00000475195 CA6P23280 308 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 MMP16P51512 607 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 PSMA6P60900 246 aaKnown RBP13.88□□□□□ -0.19
ATG4B-216ENST00000475195 SNRPGP62308 76 aaKnown RBP13.88□□□□□ -0.19
ATG4B-216ENST00000475195 AVPI1Q5T686 147 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 ZBTB49Q6ZSB9 765 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 KRT77Q7Z794 578 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 PEG10Q86TG7 708 aaKnown RBP13.88□□□□□ -0.19
ATG4B-216ENST00000475195 LRRC28Q86X40 367 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-216ENST00000475195 SPERTQ8NA61 448 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 Q8TCH9 128 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 UBE2FQ969M7 185 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 REEP6Q96HR9 211 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 OR10A2Q9H208 303 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 ZNF391Q9UJN7 358 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 N6AMT1Q9Y5N5 214 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 ORC6Q9Y5N6 252 aa13.88□□□□□ -0.19
ATG4B-216ENST00000475195 PHYHO14832 338 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 TBX1O43435 398 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 IGHV2-5P01817 119 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 ANPEPP15144 967 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 PMELP40967 661 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 DVL1P1P54792 670 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-216ENST00000475195 POU4F2Q12837 409 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 OR8B8Q15620 311 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 TIGD6Q17RP2 521 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 SLC35F2Q8IXU6 374 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 OR56B2PQ8NGI1 322 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 RFKQ969G6 155 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 PGAM5Q96HS1 289 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 MBOAT4Q96T53 435 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 ZNF665Q9H7R5 613 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 FAM206AQ9NX38 181 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 CDC42EP3Q9UKI2 254 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 KCNS2Q9ULS6 477 aa13.87□□□□□ -0.19
ATG4B-216ENST00000475195 A0A0U1RQV5 110 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 SRSF10O75494 262 aaKnown RBP13.86□□□□□ -0.19
ATG4B-216ENST00000475195 IGLV3-1P01715 115 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 OR2T7P0C7T2 308 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 GSK3AP49840 483 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 EGR3Q06889 387 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 HNRNPA0Q13151 305 aaKnown RBP13.86□□□□□ -0.19
ATG4B-216ENST00000475195 OR8G1Q15617 311 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 OCLNQ16625 522 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 ZIK1Q3SY52 487 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-216ENST00000475195 TMEM155Q4W5P6 130 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 ZNF322Q6U7Q0 402 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-216ENST00000475195 RFLNBQ8N5W9 214 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 OR51G2Q8NGK0 314 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 OR2T27Q8NH04 317 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 ZNF420Q8TAQ5 688 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-216ENST00000475195 LYZL4Q96KX0 146 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 NARFLQ9H6Q4 476 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 BRD7Q9NPI1 651 aa13.86□□□□□ -0.19
ATG4B-216ENST00000475195 TMEM269A0A1B0GVZ9 245 aa13.85□□□□□ -0.19
ATG4B-216ENST00000475195 ZNF670-ZNF695F2Z2N8 137 aa13.85□□□□□ -0.19
ATG4B-216ENST00000475195 SLC16A6O15403 523 aa13.85□□□□□ -0.19
ATG4B-216ENST00000475195 GABRB1P18505 474 aa13.85□□□□□ -0.19
ATG4B-216ENST00000475195 CPT2P23786 658 aa13.85□□□□□ -0.19
ATG4B-216ENST00000475195 RBMXP38159 391 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms