RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CCDC124Q96CT7 223 aaKnown RBP11.58□□□□□ -0.56
CCDC78-209ENST00000474647 GPX7Q96SL4 187 aaPredicted RBP11.58□□□□□ -0.56
CCDC78-209ENST00000474647 SIRPDQ9H106 197 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 SRA1Q9HD15 236 aaKnown RBP11.58□□□□□ -0.56
CCDC78-209ENST00000474647 AURKCQ9UQB9 309 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 A0A1B0GWJ7 208 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 hCG_1807616A0A1W2PRN6 198 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 OOEPA6NGQ2 149 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 A6NLC8 198 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 LGALS8O00214 317 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 PTP4A3O75365 173 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 HLA-DQA2P01906 255 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 GYPAP02724 150 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 MSX2P35548 267 aaPredicted RBP11.57□□□□□ -0.56
CCDC78-209ENST00000474647 GGT2P36268 569 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 IER3P46695 156 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 TRAP1Q12931 704 aaKnown RBP11.57□□□□□ -0.56
CCDC78-209ENST00000474647 TRIM25Q14258 630 aaKnown RBP11.57□□□□□ -0.56
CCDC78-209ENST00000474647 RSPO1Q2MKA7 263 aaPredicted RBP11.57□□□□□ -0.56
CCDC78-209ENST00000474647 DHRS7BQ6IAN0 325 aaPredicted RBP11.57□□□□□ -0.56
CCDC78-209ENST00000474647 GLYATQ6IB77 296 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 LCN8Q6JVE9 175 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 COLCA1Q6ZS62 124 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 CBLL1Q75N03 491 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 LNX2Q8N448 690 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 OR2AJ1Q8NGZ0 328 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 ST8SIA4Q92187 359 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 ERMAPQ96PL5 475 aaPredicted RBP11.57□□□□□ -0.56
CCDC78-209ENST00000474647 DPAGT1Q9H3H5 408 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 FN3KQ9H479 309 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 ANKRD19PQ9H560 264 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 GORASP2Q9H8Y8 452 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 C1orf123Q9NWV4 160 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 ACTR3BQ9P1U1 418 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 NOP16Q9Y3C1 178 aaKnown RBP11.57□□□□□ -0.56
CCDC78-209ENST00000474647 FAM96BQ9Y3D0 163 aa11.57□□□□□ -0.56
CCDC78-209ENST00000474647 IGHV3OR15-7A0A075B7D8 119 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 IGLV1-36A0A0B4J1U3 117 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 TRAV38-1A0A0B4J264 116 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 UNC119BA6NIH7 251 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 ACOT8O14734 319 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 OR10H3O60404 316 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 GMNNO75496 209 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 RENP00797 406 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 H1F0P07305 194 aaKnown RBP11.56□□□□□ -0.56
CCDC78-209ENST00000474647 GRPP07492 148 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 ATP6V1B2P21281 511 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 FXYD6P3P58550 94 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 MS4A2Q01362 244 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 C2orf68Q2NKX9 166 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 SLC18B1Q6NT16 456 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 SMARCD3Q6STE5 483 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 DPY19L2P2Q6ZN68 376 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 GDPGP1Q6ZNW5 385 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 Q6ZSV7 163 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 BTN2A1Q7KYR7 527 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 VMO1Q7Z5L0 202 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 LDLRAD3Q86YD5 345 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 SLC26A10Q8NG04 563 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 OR2AE1Q8NHA4 323 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 FANK1Q8TC84 345 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 LRTOMTQ8WZ04 291 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 FAM162AQ96A26 154 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 NMNAT3Q96T66 252 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 SEMA6AQ9H2E6 1030 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 KRCC1Q9NPI7 259 aaPredicted RBP11.56□□□□□ -0.56
CCDC78-209ENST00000474647 TRIM36Q9NQ86 728 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 RPRD1BQ9NQG5 326 aaKnown RBP11.56□□□□□ -0.56
CCDC78-209ENST00000474647 ONECUT1Q9UBC0 465 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 B9D1Q9UPM9 204 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 POMPQ9Y244 141 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 ENPP4Q9Y6X5 453 aa11.56□□□□□ -0.56
CCDC78-209ENST00000474647 BTBD17A6NE02 478 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 GGT3PA6NGU5 568 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 CD300LBA8K4G0 201 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 M0R135 149 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 DVL1O14640 695 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 OMPP47874 163 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 TPTEP56180 551 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 POU4F2Q12837 409 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 ECH1Q13011 328 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 KRTAP27-1Q3LI81 207 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 ZNF826PQ6ZT77 177 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 DHFR2Q86XF0 187 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 FAM90A1Q86YD7 464 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 OR6V1Q8N148 313 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 ZNF799Q96GE5 643 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 NSMCE2Q96MF7 247 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 RAB3IPQ96QF0 476 aaPredicted RBP11.55□□□□□ -0.56
CCDC78-209ENST00000474647 SLC22A4Q9H015 551 aa11.55□□□□□ -0.56
CCDC78-209ENST00000474647 DCAF13Q9NV06 445 aaKnown RBP11.55□□□□□ -0.56
CCDC78-209ENST00000474647 FAM32AQ9Y421 112 aaKnown RBP11.55□□□□□ -0.56
CCDC78-209ENST00000474647 TRBV4-1A0A0J9YWV2 114 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 NDUFA2O43678 99 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 GMDSO60547 372 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 TXNDC12O95881 172 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 CSF1P09603 554 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 EGR3Q06889 387 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 FLOT2Q14254 428 aa11.54□□□□□ -0.56
CCDC78-209ENST00000474647 SEC23BQ15437 767 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms