RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TRAV6A0A075B6T7 132 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 LMX1BO60663 402 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 NDUFB6O95139 128 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 C1QBP02746 253 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 IL5P05113 134 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 MELTFP08582 738 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 ARL6IP1Q15041 203 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 RBMS2Q15434 407 aaKnown RBP19.09■□□□□ 0.65
CCM2-206ENST00000474617 CEACAM16Q2WEN9 425 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 SLC16A14Q7RTX9 510 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 OR5AS1Q8N127 324 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 CHST5Q9GZS9 411 aa19.09■□□□□ 0.65
CCM2-206ENST00000474617 MED12Q93074 2177 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 ARGFXA6NJG6 315 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 FAM166BA8MTA8 275 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 TMEM14DPA8MWL7 114 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 ITGB2P05107 769 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 SLC2A1P11166 492 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 CPN1P15169 458 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 CCR6P51684 374 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 PLA2G7Q13093 441 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 ZMYND11Q15326 602 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 ZNF766Q5HY98 468 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 AWAT2Q6E213 333 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 SSC4DQ8WTU2 575 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 ABHD3Q8WU67 409 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 ZNF845Q96IR2 970 aaPredicted RBP19.08■□□□□ 0.64
CCM2-206ENST00000474617 TECTBQ96PL2 329 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 PRRG4Q9BZD6 226 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 GPN1Q9HCN4 374 aaPredicted RBP19.08■□□□□ 0.64
CCM2-206ENST00000474617 RANGRFQ9HD47 186 aaPredicted RBP19.08■□□□□ 0.64
CCM2-206ENST00000474617 ZNF319Q9P2F9 582 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 UPB1Q9UBR1 384 aa19.08■□□□□ 0.64
CCM2-206ENST00000474617 SPAARA0A1B0GVQ0 90 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 ZNF587BE7ETH6 402 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 KDM4BO94953 1096 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 HCKP08631 526 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 COX5BP10606 129 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 FCGR2AP12318 317 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 CEACAM1P13688 526 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 TBPP20226 339 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 NBL1P41271 181 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 RSPO1Q2MKA7 263 aaPredicted RBP19.07■□□□□ 0.64
CCM2-206ENST00000474617 ANGPTL5Q86XS5 388 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 ZNF100Q8IYN0 542 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 AQP3Q92482 292 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 SPSB1Q96BD6 273 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 SEH1LQ96EE3 360 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 ALKBH3Q96Q83 286 aaPredicted RBP19.07■□□□□ 0.64
CCM2-206ENST00000474617 HES7Q9BYE0 225 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 CST11Q9H112 138 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 MRPS28Q9Y2Q9 187 aaKnown RBP19.07■□□□□ 0.64
CCM2-206ENST00000474617 ZNF175Q9Y473 711 aa19.07■□□□□ 0.64
CCM2-206ENST00000474617 FAM172BPA6NC97 362 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 SNRPGP15A8MWD9 76 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 SNAPC5O75971 98 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 ABOP16442 354 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 MRPS15P82914 257 aaKnown RBP19.06■□□□□ 0.64
CCM2-206ENST00000474617 CD83Q01151 205 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 TCF15Q12870 199 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 MEF2DQ14814 521 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 MTFR2Q6P444 385 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 MCEMP1Q8IX19 187 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 GIMAP1Q8WWP7 306 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 URM1Q9BTM9 101 aaKnown RBP19.06■□□□□ 0.64
CCM2-206ENST00000474617 OR2H1Q9GZK4 316 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 SLC6A15Q9H2J7 730 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 ZDHHC11Q9H8X9 412 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 NOX3Q9HBY0 568 aa19.06■□□□□ 0.64
CCM2-206ENST00000474617 NCOA6Q14686 2063 aaPredicted RBP19.05■□□□□ 0.64
CCM2-206ENST00000474617 GMDSO60547 372 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 ICMTO60725 284 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 CYB5AP00167 134 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 GSTP1P09211 210 aaKnown RBP19.05■□□□□ 0.64
CCM2-206ENST00000474617 VSIG8P0DPA2 414 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 GTF2F2P13984 249 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 ZNF32P17041 273 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 NTF4P34130 210 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 ZBTB37Q5TC79 503 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 IGFL2Q6UWQ7 119 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 SEMA6DQ8NFY4 1073 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 GCDHQ92947 438 aaPredicted RBP19.05■□□□□ 0.64
CCM2-206ENST00000474617 ZNF837Q96EG3 531 aaPredicted RBP19.05■□□□□ 0.64
CCM2-206ENST00000474617 SLC25A21Q9BQT8 299 aaPredicted RBP19.05■□□□□ 0.64
CCM2-206ENST00000474617 RAB27BO00194 218 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 TNFRSF10AO00220 468 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 ANXA3P12429 323 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 B4GALT1P15291 398 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 PRKACBP22694 351 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 TNFSF10P50591 281 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 SFRP4Q6FHJ7 346 aaPredicted RBP19.05■□□□□ 0.64
CCM2-206ENST00000474617 STEAP1BQ6NZ63 245 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 ZNF782Q6ZMW2 699 aaPredicted RBP19.05■□□□□ 0.64
CCM2-206ENST00000474617 BIVMQ86UB2 503 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 ZNF101Q8IZC7 436 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 APH1AQ96BI3 265 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 LYZL4Q96KX0 146 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 PRDM14Q9GZV8 571 aa19.05■□□□□ 0.64
CCM2-206ENST00000474617 ZNF552Q9H707 407 aaPredicted RBP19.05■□□□□ 0.64
CCM2-206ENST00000474617 XRCC2O43543 280 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms