RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CALHM3Q86XJ0 350 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 PARP16Q8N5Y8 322 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 OR10G4Q8NGN3 311 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 OR4A4PQ8NGN8 299 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 WNT2BQ93097 391 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 CLDN23Q96B33 292 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 RCN3Q96D15 328 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 APOL4Q9BPW4 351 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 NRIP2Q9BQI9 281 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 TMEM39BQ9GZU3 492 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 SYNPO2LQ9H987 977 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 ATG2AQ2TAZ0 1938 aa3.07□□□□□ -1.92
UBR3-208ENST00000474426 COL5A2P05997 1499 aaPredicted RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 PALLDQ8WX93 1383 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 A0A1W2PQJ5 194 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 OR5H15A6NDH6 313 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 E7ENX8 843 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 F5H5K5 113 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 SLC1A7O00341 560 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 FABP7O15540 132 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 HIST1H2AGP0C0S8 130 aaPredicted RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 PSG1P11464 419 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 HIST1H2ADP20671 130 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 POLR2IP36954 125 aaKnown RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 AMTP48728 403 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 HCCSP53701 268 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 TRAF3Q13114 568 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 HIST2H2AA3Q6FI13 130 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 GLYATQ6IB77 296 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 ZNF343Q6P1L6 599 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 MOB3CQ70IA8 216 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 TDHQ8IZJ6 230 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 OR10R2Q8NGX6 335 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 CANT1Q8WVQ1 401 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 FAM151AQ8WW52 585 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 FAM46AQ96IP4 442 aaKnown RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 HIST1H2AHQ96KK5 128 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 FEVQ99581 238 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 COPS8Q99627 209 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 HIST1H2AJQ99878 128 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 PRDM14Q9GZV8 571 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 PATZ1Q9HBE1 687 aaKnown RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 KLK11Q9UBX7 282 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 LOXHD1Q8IVV2 1947 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 ANKRD26Q9UPS8 1709 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 KIAA0586Q9BVV6 1533 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 A0A1B0GU03 582 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 A0A1W2PPI3 338 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 A0A1W2PPK0 400 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 CASTOR2A6NHX0 329 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 ENSAO43768 121 aaKnown RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 OR2T1O43869 369 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 CTSDP07339 412 aaPredicted RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 MYL9P24844 172 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 DCTP40126 519 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 GABRA2P47869 451 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 RPL29P47914 159 aaKnown RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 HIST1H1AQ02539 215 aaPredicted RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 PLP2Q04941 152 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 OR2F1Q13607 317 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 ZNF284Q2VY69 593 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 LINC01559Q495D7 138 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 HIST2H3PS2Q5TEC6 136 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 FBXW12Q6X9E4 464 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 DOK3Q7L591 496 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 ZNF367Q7RTV3 350 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 P2RY8Q86VZ1 359 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 SPICQ8N5J4 248 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 RELL2Q8NC24 303 aaPredicted RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 LINC00301Q8NCQ3 95 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 OR13H1Q8NG92 308 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 OR6T1Q8NGN1 323 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 NEIL2Q969S2 332 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 DNAJC30Q96LL9 226 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 KREMEN1Q96MU8 473 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 GINS3Q9BRX5 216 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 TAPBPLQ9BX59 468 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 ACSS3Q9H6R3 686 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 GPATCH2Q9NW75 528 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 GPATCH2LQ9NWQ4 482 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 THYN1Q9P016 225 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 SLC7A7Q9UM01 511 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 SPIN1Q9Y657 262 aaPredicted RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 MYO5CQ9NQX4 1742 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 DOCK3Q8IZD9 2030 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 IGSF9BQ9UPX0 1349 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 MYO18AQ92614 2054 aaKnown RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 A0A087WWV3 80 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 C1orf226A1L170 272 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 B4DXG7 233 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 PRSS46E5RG02 174 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 LMO7DNF2Z398 122 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 DCTN6O00399 190 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 DEGS1O15121 323 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 ERI3O43414 337 aaKnown RBP3.06□□□□□ -1.92
UBR3-208ENST00000474426 ALOX12BO75342 701 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 CNMDO75829 334 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 OPN1SWP03999 348 aa3.06□□□□□ -1.92
UBR3-208ENST00000474426 LIMS3P0CW19 117 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms