RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RIN1Q13671 783 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 OR8G1Q15617 311 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 Q6ZR03 302 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 COMMD2Q86X83 199 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 DHRSXQ8N5I4 330 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 YIPF7Q8N8F6 280 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 OR10AD1Q8NGE0 317 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 RAB1CQ92928 201 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 YIPF5Q969M3 257 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 SGK3Q96BR1 496 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 RNFT2Q96EX2 444 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 MRPL48Q96GC5 212 aaKnown RBP11.68□□□□□ -0.54
USF1-205ENST00000473969 OR2V2Q96R30 315 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 SMR3AQ99954 134 aa11.68□□□□□ -0.54
USF1-205ENST00000473969 GSX1Q9H4S2 264 aaPredicted RBP11.68□□□□□ -0.54
USF1-205ENST00000473969 MRPL15Q9P015 296 aaKnown RBP11.68□□□□□ -0.54
USF1-205ENST00000473969 HIVEP1P15822 2718 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 IFNL4K9M1U5 179 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 LY6G6DO95868 133 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 CA6P23280 308 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 GNALP38405 381 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 ACTC1P68032 377 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 ACTA1P68133 377 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 SLC34A1Q06495 639 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 FAM220AQ7Z4H9 259 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 ENTHD1Q8IYW4 607 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 SPERTQ8NA61 448 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 SETD9Q8NE22 299 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 OR56B2PQ8NGI1 322 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 ITLN1Q8WWA0 313 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 SPSB4Q96A44 273 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 TREM2Q9NZC2 230 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 PPP1R3CQ9UQK1 317 aa11.67□□□□□ -0.54
USF1-205ENST00000473969 IGHV4-61A0A0C4DH41 118 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 A0A1W2PQL4 384 aaPredicted RBP11.66□□□□□ -0.54
USF1-205ENST00000473969 DAPL1A0PJW8 107 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 METTL15A6NJ78 407 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 LRRC30A6NM36 301 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 E9PQ18 207 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 LOC110117498-PIK3R3F6TDL0 507 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 H0YL77 283 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 CASQ2O14958 399 aaPredicted RBP11.66□□□□□ -0.54
USF1-205ENST00000473969 GMDSO60547 372 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 RP2O75695 350 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 HLA-DPB1P04440 258 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 TACSTD2P09758 323 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 IRF2P14316 349 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 GSK3AP49840 483 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 GZMKP49863 264 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 FAM3AP98173 230 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 TMEM249Q2WGJ8 235 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 OGFRL1Q5TC84 451 aaPredicted RBP11.66□□□□□ -0.54
USF1-205ENST00000473969 CYB5R2Q6BCY4 276 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 PLEKHG7Q6ZR37 379 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 PRSS45Q7RTY3 260 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 KLBQ86Z14 1044 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 CSNK2A3Q8NEV1 391 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 OR8S1Q8NH09 359 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 RHOXF1Q8NHV9 184 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 MEGF10Q96KG7 1140 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 ADAT1Q9BUB4 502 aaKnown RBP11.66□□□□□ -0.54
USF1-205ENST00000473969 PBOV1Q9GZY1 135 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 MOB1AQ9H8S9 216 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 RPL36Q9Y3U8 105 aaKnown RBP11.66□□□□□ -0.54
USF1-205ENST00000473969 MED13LQ71F56 2210 aa11.66□□□□□ -0.54
USF1-205ENST00000473969 FLNAP21333 2647 aaKnown RBP11.65□□□□□ -0.54
USF1-205ENST00000473969 hCG_38984A0A1B0GV85 526 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 ISPDA4D126 451 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 C5orf63A6NC05 138 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 F5H5P2 479 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 LILRA1O75019 489 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 SULT1C4O75897 302 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 RPP14O95059 124 aaKnown RBP11.65□□□□□ -0.54
USF1-205ENST00000473969 FADS2O95864 444 aaKnown RBP11.65□□□□□ -0.54
USF1-205ENST00000473969 MMP16P51512 607 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 MVKQ03426 396 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 BCL2L15Q5TBC7 163 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 Q71RC1 249 aaPredicted RBP11.65□□□□□ -0.54
USF1-205ENST00000473969 ZNF771Q7L3S4 317 aaPredicted RBP11.65□□□□□ -0.54
USF1-205ENST00000473969 C1orf87Q8N0U7 546 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 RFLNBQ8N5W9 214 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 CELF2-AS1Q8N7Q2 184 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 OR8B12Q8NGG6 310 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 OR11L1Q8NGX0 322 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 HPS1Q92902 700 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 ITFG2Q969R8 447 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 HIST1H2AAQ96QV6 131 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 VCX3BQ9H321 246 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 NARFLQ9H6Q4 476 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 TMEM106BQ9NUM4 274 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 C14orf119Q9NWQ9 140 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 FAM206AQ9NX38 181 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 MRM2Q9UI43 246 aaKnown RBP11.65□□□□□ -0.54
USF1-205ENST00000473969 GNG8Q9UK08 70 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 SNX5Q9Y5X3 404 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 R4GMQ9 66 aa11.65□□□□□ -0.54
USF1-205ENST00000473969 A0A096LNT2 108 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 A0A0U1RQV5 110 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 LRP5LA4QPB2 252 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 ANXA2P2A6NMY6 339 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms