RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PROX1Q92786 737 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 RPL3LQ92901 407 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CDS1Q92903 461 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TSLPQ969D9 159 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 C12orf43Q96C57 262 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 YIPF6Q96EC8 236 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NRBF2Q96F24 287 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ZBED6CLQ96FA7 236 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TPD52L3Q96J77 140 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 PRRC1Q96M27 445 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 FER1L6-AS2Q96M78 137 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 VSTM2LQ96N03 204 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 MS4A4EQ96PG1 132 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CDX2Q99626 313 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DOK1Q99704 481 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SH3GL1Q99961 368 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 PRSS27Q9BQR3 290 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DCUN1D5Q9BTE7 237 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DOHHQ9BU89 302 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 KATNB1Q9BVA0 655 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 UGT2B28Q9BY64 529 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 GSDMCQ9BYG8 508 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NLNQ9BYT8 704 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 FAM192AQ9GZU8 254 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF350Q9GZX5 532 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 VCXQ9H320 206 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SRMSQ9H3Y6 488 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 Q9H521 79 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DUSP21Q9H596 190 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 RNF167Q9H6Y7 350 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 EGLN3Q9H6Z9 239 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 REEP1Q9H902 201 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NMNAT1Q9HAN9 279 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 LMAN1LQ9HAT1 526 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 FANCEQ9HB96 536 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 BCL2L10Q9HD36 194 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 C8orf4Q9NR00 106 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 PRMT8Q9NR22 394 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ZCCHC3Q9NUD5 404 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DDX18Q9NVP1 670 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 HRASLS2Q9NWW9 162 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 LYARQ9NX58 379 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CHCHD3Q9NX63 227 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 GIN1Q9NXP7 522 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TAS2R7Q9NYW3 318 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 MAT2BQ9NZL9 334 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DNAJC27Q9NZQ0 273 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ERVK-18Q9QC07 812 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 P2RX2Q9UBL9 471 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TRPC4Q9UBN4 977 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SPASTQ9UBP0 616 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 C3orf18Q9UK00 162 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF223Q9UK11 482 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 RAB23Q9ULC3 237 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ENTPD4Q9Y227 616 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ANGPT4Q9Y264 503 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF443Q9Y2A4 671 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NCKAP1Q9Y2A7 1128 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 AP3M1Q9Y2T2 418 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 YARS2Q9Y2Z4 477 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 LSM2Q9Y333 95 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SAMHD1Q9Y3Z3 626 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 LIPGQ9Y5X9 500 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 HEBP2Q9Y5Z4 205 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SLC22A7Q9Y694 548 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 U3KQA8 63 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 APCP25054 2843 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NIPBLQ6KC79 2804 aaeCLIP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DNAH8Q96JB1 4490 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CCDC168Q8NDH2 2452 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SONP18583 2426 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 FRAS1Q86XX4 4008 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 FBN2P35556 2912 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TEX15Q9BXT5 2789 aa1.15□□□□□ -2.22
CCDC39-203ENST00000473854 STARD9Q9P2P6 4700 aa1.15□□□□□ -2.22
CCDC39-203ENST00000473854 FASNP49327 2511 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 KMT2BQ9UMN6 2715 aaPredicted RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 IGKV1D-42A0A075B6H8 117 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 A0A087WUU8 490 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 A0A087WV48 116 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 A0A087WXM4 84 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 IGHV1OR21-1A0A087WYE8 117 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 IGKV3D-11A0A0A0MRZ8 115 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 A0A0B4J2E0 115 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 KIR2DL5BA0A0G2JN68 375 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 KIR2DL5BA0A0G2JPC4 375 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1B0GX12 115 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1W2PRQ8 180 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 SH3PXD2BA1X283 911 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CCDC182A6NF36 153 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 TLCD2A6NGC4 264 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CCDC160A6NGH7 325 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 METTL15A6NJ78 407 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 CPSF4LA6NMK7 179 aaKnown RBP1.15□□□□□ -2.23
CCDC39-203ENST00000473854 OR5K4A6NMS3 321 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 C2orf74A8MZ97 194 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 C5orf58C9J3I9 102 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 LRRN3E7EW58 273 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 LMO7DNF2Z398 122 aa1.15□□□□□ -2.23
CCDC39-203ENST00000473854 J3QRE1 110 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms