RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CTSVO60911 334 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 LRP3O75074 770 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 SYNGR4O95473 234 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 PPP1R3DO95685 299 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 OPN1SWP03999 348 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 H1F0P07305 194 aaKnown RBP4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 ELAVL4P26378 380 aaKnown RBP4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 OR3A2P47893 321 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 GLIPR1P48060 266 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC35A1P78382 337 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 HMGCS1Q01581 520 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 PRDX4Q13162 271 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 LRRC37A5PQ49AS3 106 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 PLPPR4Q7Z2D5 763 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 IQCF1Q8N6M8 205 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 ARL14EPQ8N8R7 260 aaPredicted RBP4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 NOXO1Q8NFA2 376 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 OR4D5Q8NGN0 318 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 RGP1Q92546 391 aaPredicted RBP4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 DCUN1D4Q92564 292 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 RBKSQ9H477 322 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 CDH20Q9HBT6 801 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 IL23AQ9NPF7 189 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF701Q9NV72 531 aaPredicted RBP4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 OR5AC2Q9NZP5 309 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 RNF181Q9P0P0 153 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 RNF150Q9ULK6 438 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 MEMO1Q9Y316 297 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 MRPS2Q9Y399 296 aaKnown RBP4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 OR51B4Q9Y5P0 310 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 COX11Q9Y6N1 276 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 SHROOM3Q8TF72 1996 aa4.57□□□□□ -1.68
TMEM39A-206ENST00000473684 TRBC2A0A5B9 178 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 YJEFN3A6XGL0 299 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 PROB1E7EW31 1015 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 PRAMEF26H0Y7S4 382 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 M0QZ24 198 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 YY2O15391 372 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ERAL1O75616 437 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 NDUFB8O95169 186 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ABHD16AO95870 558 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC16A8O95907 504 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 PDGFBP01127 241 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TRBC1P01850 177 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 C8AP07357 584 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 MMP7P09237 267 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 OR5G3P0C626 314 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF7P17097 686 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TAL1P17542 331 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 GZMHP20718 246 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 HTR1FP30939 366 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TFPI2P48307 235 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 RPL34P49207 117 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 COMPP49747 757 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 STC1P52823 247 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 BATFQ16520 125 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 BSXQ3C1V8 233 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ACSM3Q53FZ2 586 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ENTPD8Q5MY95 495 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 CST9Q5W186 159 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ANKRD16Q6P6B7 361 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 COLCA1Q6ZS62 124 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 BIVMQ86UB2 503 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF761Q86XN6 746 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SELENOHQ8IZQ5 122 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 D2HGDHQ8N465 521 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 NPWQ8N729 165 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SIDT2Q8NBJ9 832 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 OR4K14Q8NGD5 310 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 DNASE2BQ8WZ79 361 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 MCHR2Q969V1 340 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 HAVCR1Q96D42 359 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 PPP1R16AQ96I34 528 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF479Q96JC4 524 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TSSK3Q96PN8 268 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 AQP10Q96PS8 301 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 NDC1Q9BTX1 674 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 EIF5A2Q9GZV4 153 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 DEFB129Q9H1M3 183 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 GPR35Q9HC97 309 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TMEM242Q9NWH2 141 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 NOP16Q9Y3C1 178 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SNX10Q9Y5X0 201 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ETV7Q9Y603 341 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TDRD15B5MCY1 1934 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 WDR81Q562E7 1941 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TRBV24-1A0A075B6N3 115 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 LOC100509620A0A075B734 347 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TGIF2-C20orf24A0A0A6YYL0 155 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 IGHV2OR16-5A0A0B4J2B6 119 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 C1orf226A1L170 272 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ANKUB1A6NFN9 424 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TLCD2A6NGC4 264 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 RAB27BO00194 218 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 GAPDHSO14556 408 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF354AO60765 605 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 TNFSF15O95150 251 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 GPANK1O95872 356 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 SCGB1D1O95968 90 aa4.56□□□□□ -1.68
TMEM39A-206ENST00000473684 C1QCP02747 245 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms