RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RAB35Q15286 201 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 TSC22D1Q15714 1073 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 HIKESHIQ53FT3 197 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 RIPPLY2Q5TAB7 128 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 LYPD6Q86Y78 171 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 NAXEQ8NCW5 288 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 PIGTQ969N2 578 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 TRIB1Q96RU8 372 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 OR51B6Q9H340 312 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 MOB1AQ9H8S9 216 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 RNF121Q9H920 327 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 BCO1Q9HAY6 547 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 SLC17A5Q9NRA2 495 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 POU2F3Q9UKI9 436 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 NBASA2RRP1 2371 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 TRAV6A0A075B6T7 132 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 ZNF587BE7ETH6 402 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 HCKP08631 526 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 MMP7P09237 267 aaPredicted RBP5.43□□□□□ -1.54
CLK1-210ENST00000473565 FAM157BP0CG42 384 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 RAB3AP20336 220 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 AGTR1P30556 359 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 OTX1P32242 354 aaPredicted RBP5.43□□□□□ -1.54
CLK1-210ENST00000473565 OR3A4PP47883 348 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 MMP15P51511 669 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 TPTEP56180 551 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 SCRN3Q0VDG4 424 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 BCL2A1Q16548 175 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 RHOUQ7L0Q8 258 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 ZNF627Q7L945 461 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 TOMM5Q8N4H5 51 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 ACBD4Q8NC06 268 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 OR6M1Q8NGM8 313 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 UBASH3BQ8TF42 649 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 SMIM4Q8WVI0 70 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 SPTSSAQ969W0 71 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 MS4A3Q96HJ5 214 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 TMEM138Q9NPI0 162 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 RBFOX1Q9NWB1 397 aaKnown RBP5.43□□□□□ -1.54
CLK1-210ENST00000473565 ETAA1Q9NY74 926 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 PIGLQ9Y2B2 252 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 ETV7Q9Y603 341 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 CACNG2Q9Y698 323 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 PIEZO1Q92508 2521 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 CIB4A0PJX0 185 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 OR6C6A6NF89 314 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 GGT3PA6NGU5 568 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 GMDSO60547 372 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 CEACAM4O75871 244 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 PLATP00750 562 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 CPN1P15169 458 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 CTSSP25774 331 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 ZNF93P35789 620 aaPredicted RBP5.43□□□□□ -1.54
CLK1-210ENST00000473565 UNC119Q13432 240 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 UBE2V2Q15819 145 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 SFRP4Q6FHJ7 346 aaPredicted RBP5.43□□□□□ -1.54
CLK1-210ENST00000473565 PLET1Q6UQ28 207 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 DOK3Q7L591 496 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 P4HA3Q7Z4N8 544 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 OR5D14Q8NGL3 314 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 SNIP1Q8TAD8 396 aaKnown RBP5.43□□□□□ -1.54
CLK1-210ENST00000473565 THRSPQ92748 146 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 BEX2Q9BXY8 128 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 BEX1Q9HBH7 125 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 GPR173Q9NS66 373 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 PARPBPQ9NWS1 579 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 B3GNT2Q9NY97 397 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 TIMM10BQ9Y5J6 103 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 ZGRF1Q86YA3 2104 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 KALRNO60229 2985 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 RELNP78509 3460 aa5.43□□□□□ -1.54
CLK1-210ENST00000473565 SMG1Q96Q15 3661 aaKnown RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 ADGRG4Q8IZF6 3080 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 LOC100509620A0A075B734 347 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 WIPF3A6NGB9 483 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 SULT1B1O43704 296 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 FARS2O95363 451 aaKnown RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 CCL1P22362 96 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 GIFP27352 417 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 NR4A2P43354 598 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 PITPNAQ00169 270 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 PMPCAQ10713 525 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 TNK1Q13470 666 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 KLF9Q13886 244 aaPredicted RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 RNPS1Q15287 305 aaKnown RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 AWAT2Q6E213 333 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ANKRD16Q6P6B7 361 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 C3P1Q6ZMU1 363 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 C1QL2Q7Z5L3 287 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ADGRE4PQ86SQ3 457 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 ANGPTL5Q86XS5 388 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 PAQR4Q8N4S7 273 aaPredicted RBP5.42□□□□□ -1.54
CLK1-210ENST00000473565 CNEP1R1Q8N9A8 125 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 TMEM104Q8NE00 496 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 OR10K1Q8NGX5 313 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 RAB40AQ8WXH6 277 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 REEP6Q96HR9 211 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 GPER1Q99527 375 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 NICN1Q9BSH3 213 aa5.42□□□□□ -1.54
CLK1-210ENST00000473565 BANF2Q9H503 90 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms