RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CBLN2Q8IUK8 224 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 FAM71E2Q8N5Q1 922 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 RXFP4Q8TDU9 374 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 PTPMT1Q8WUK0 201 aaPredicted RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 C10orf35Q96D05 121 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 SLAMF6Q96DU3 332 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ELF4Q99607 663 aaPredicted RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 RNF126Q9BV68 326 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 SLC5A7Q9GZV3 580 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 SLC26A1Q9H2B4 701 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 HRH4Q9H3N8 390 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 KCNK15Q9H427 330 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ZNF768Q9H5H4 540 aaKnown RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 SDHAF3Q9NRP4 125 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 SERINC1Q9NRX5 453 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 FAM206AQ9NX38 181 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ALKBH4Q9NXW9 302 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 LOC100509620A0A075B734 347 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 SPTY2D1-AS1A0A0U1RR47 76 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 H3BSH0 61 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 WRBO00258 174 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 TLX3O43711 291 aaPredicted RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 IFNA17P01571 189 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 PMP2P02689 132 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 IGKV3-11P04433 115 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 CD5P06127 495 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 SPP1P10451 314 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 GLULP15104 373 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 GUCA1AP43080 201 aaPredicted RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 ARL4DP49703 201 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 C17orf67Q0P5P2 114 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ECH1Q13011 328 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 EBPQ15125 230 aaKnown RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 MOGAT2Q3SYC2 334 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 CHRFAM7AQ494W8 412 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 GPR157Q5UAW9 335 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ASPHD2Q6ICH7 369 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 CLEC18BQ6UXF7 455 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ZSCAN4Q8NAM6 433 aaPredicted RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 OR51A2Q8NGJ7 313 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 GPR119Q8TDV5 335 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 KIRREL1Q96J84 757 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 KCNK17Q96T54 332 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 GPER1Q99527 375 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 RAB33BQ9H082 229 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 OR10A2Q9H208 303 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 METTL1Q9UBP6 276 aaKnown RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 CLDN16Q9Y5I7 305 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 A0A087WV48 116 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 A0A1W2PNV4 684 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 VSTM2BA6NLU5 285 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 C4orf47A7E2U8 309 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 H0Y8X5 98 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 UBE2CO00762 179 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 MPIG6BO95866 241 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 HCKP08631 526 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 SEC11BP0C7V7 166 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 LIPCP11150 499 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ADCYAP1P18509 176 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 LAP3P28838 519 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 S100A10P60903 97 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 CSNK2A1P68400 391 aaPredicted RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 TLE3Q04726 772 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 KCNAB1Q14722 419 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 KIAA0895LQ68EN5 471 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 POMZP3Q6PJE2 187 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 GLIPR1L1Q6UWM5 242 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 CHRDL2Q6WN34 429 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 COMMD2Q86X83 199 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 POC1AQ8NBT0 407 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ADAD2Q8NCV1 583 aaKnown RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 CSNK2A3Q8NEV1 391 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 OR9K2Q8NGE7 335 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 OR1J1Q8NGS3 322 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 MRGPRX1Q96LB2 322 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 TAAR9Q96RI9 348 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 ZMAT3Q9HA38 289 aaKnown RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 ZNF304Q9HCX3 659 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 OR2S2Q9NQN1 319 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 SLC2A4RGQ9NR83 387 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 CUTCQ9NTM9 273 aa5.45□□□□□ -1.54
HERC4-209ENST00000473533 RPH3AQ9Y2J0 694 aaPredicted RBP5.45□□□□□ -1.54
HERC4-209ENST00000473533 E5RGE8 158 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 RRP8O43159 456 aaKnown RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 SGCEO43556 437 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 CDC14BO60729 498 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 GNB3P16520 340 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 ZNF14P17017 642 aaPredicted RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 CPT2P23786 658 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 RPL12P30050 165 aaKnown RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 NPBWR1P48145 328 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 ARHGDIBP52566 201 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 HSF1Q00613 529 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 UNC119Q13432 240 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 EIF2S3LQ2VIR3 472 aaKnown RBP5.44□□□□□ -1.54
HERC4-209ENST00000473533 OR52W1Q6IF63 320 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 BTNL8Q6UX41 500 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 MARCH3Q86UD3 253 aa5.44□□□□□ -1.54
HERC4-209ENST00000473533 LHFPL1Q86WI0 220 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms