RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 SFTA3P0C7M3 94 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 NME2P22392 152 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 DAP3P51398 398 aaKnown RBP12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 GFERP55789 205 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 POU3F1Q03052 451 aaPredicted RBP12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 RAB32Q13637 225 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 FAM109BQ6ICB4 259 aaPredicted RBP12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 RNF144BQ7Z419 303 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 COMMD2Q86X83 199 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 WDFY1Q8IWB7 410 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 PRSS58Q8IYP2 241 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 ARRDC1Q8N5I2 433 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 OR51F2Q8NH61 342 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 CRB3Q9BUF7 120 aa12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 MRPS28Q9Y2Q9 187 aaKnown RBP12.65□□□□□ -0.38
NHLRC3-204ENST00000473371 A0A0A6YYD4 124 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 IGHV5-51A0A0C4DH38 117 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 LINC01565O15544 149 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 IGHV4-34P06331 123 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 GSTP1P09211 210 aaKnown RBP12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 EIF5AP63241 154 aaKnown RBP12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 RBM39Q14498 530 aaKnown RBP12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 ELAVL1Q15717 326 aaKnown RBP12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 ANKRD55Q3KP44 614 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 ACTBL2Q562R1 376 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 DMBX1Q8NFW5 382 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 OR5H2Q8NGV7 314 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 C11orf40Q8WZ69 217 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 OR10C1Q96KK4 312 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 SCGB3A2Q96PL1 93 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 NUDT16L1Q9BRJ7 211 aaKnown RBP12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 BANF2Q9H503 90 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 FANCFQ9NPI8 374 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 FTCDNL1E5RQL4 147 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 CSTBP04080 98 aaKnown RBP12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 LYL1P12980 280 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 RAB5BP61020 215 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 HTRA3P83110 453 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 PLAC9Q5JTB6 97 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 VAX1Q5SQQ9 334 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 EIF5AL1Q6IS14 154 aaKnown RBP12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 SLC29A4Q7RTT9 530 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 FOXRED2Q8IWF2 684 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 TMEM104Q8NE00 496 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 SMIM8Q96KF7 97 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 C2orf50Q96LR7 162 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 C5orf34Q96MH7 638 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 SLC5A7Q9GZV3 580 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 WWTR1Q9GZV5 400 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 CUTCQ9NTM9 273 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 RP1P56715 2156 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 SERPINA5P05154 406 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 GABRG2P18507 467 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 BCKDHBP21953 392 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 FPR2P25090 351 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 LPAR6P43657 344 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 GPR85P60893 370 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 ARFRP1Q13795 201 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 FAM76BQ5HYJ3 339 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 RPL7L1Q6DKI1 246 aaKnown RBP12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 NAA40Q86UY6 237 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 OR51E1Q8TCB6 317 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 NECAB3Q96P71 396 aaPredicted RBP12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 LRRC61Q9BV99 259 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 FBLN5Q9UBX5 448 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 EDARQ9UNE0 448 aa12.64□□□□□ -0.39
NHLRC3-204ENST00000473371 HTR3BO95264 441 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 PET100P0DJ07 73 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 HIST1H1DP16402 221 aaKnown RBP12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 AMY2BP19961 511 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 PTGFRP43088 359 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 SLC26A1Q9H2B4 701 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 TAF9BQ9HBM6 251 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 COPS7AQ9UBW8 275 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 XIRP2A4UGR9 3374 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 IGKV3D-11A0A0A0MRZ8 115 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 ZNF354AO60765 605 aaPredicted RBP12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 EIF3GO75821 320 aaKnown RBP eCLIP12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 HOXB5P09067 269 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 CD80P33681 288 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 OR3A2P47893 321 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 SUPT4H1P63272 117 aaKnown RBP12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 FOXK1P85037 733 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 TLE3Q04726 772 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 C5orf46Q6UWT4 87 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 H1FNTQ75WM6 255 aaPredicted RBP12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 NUBPLQ8TB37 319 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 ARL5BQ96KC2 179 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 EMC6Q9BV81 110 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 SEC61A2Q9H9S3 476 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 DNAJB11Q9UBS4 358 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 PCDHGA1Q9Y5H4 931 aa12.63□□□□□ -0.39
NHLRC3-204ENST00000473371 COLCA2A8K830 154 aa12.62□□□□□ -0.39
NHLRC3-204ENST00000473371 RAD51DO75771 328 aa12.62□□□□□ -0.39
NHLRC3-204ENST00000473371 SFTPBP07988 381 aa12.62□□□□□ -0.39
NHLRC3-204ENST00000473371 RCC1P18754 421 aaPredicted RBP12.62□□□□□ -0.39
NHLRC3-204ENST00000473371 BLKP51451 505 aa12.62□□□□□ -0.39
NHLRC3-204ENST00000473371 SNRPEP62304 92 aaKnown RBP12.62□□□□□ -0.39
NHLRC3-204ENST00000473371 HSF1Q00613 529 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms