RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SNAI3Q3KNW1 292 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 LRRC23Q53EV4 343 aaPredicted RBP7.89□□□□□ -1.15
MCF2L-223ENST00000473345 SLC35E4Q6ICL7 350 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 ERICH5Q6P6B1 374 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 BTN2A1Q7KYR7 527 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 NLRC3Q7RTR2 1065 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 VMO1Q7Z5L0 202 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 DHFR2Q86XF0 187 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 LINC00346Q8IVM7 164 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 AQP12AQ8IXF9 295 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 C11orf53Q8IXP5 236 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 C10orf67Q8IYJ2 551 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 OFCC1Q8IZS5 231 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 OR2T12Q8NG77 320 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 TNFRSF14Q92956 283 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 APOBEC3DQ96AK3 386 aaPredicted RBP7.89□□□□□ -1.15
MCF2L-223ENST00000473345 CCDC124Q96CT7 223 aaKnown RBP7.89□□□□□ -1.15
MCF2L-223ENST00000473345 TPD52L3Q96J77 140 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 KCTD14Q9BQ13 255 aaPredicted RBP7.89□□□□□ -1.15
MCF2L-223ENST00000473345 WACQ9BTA9 647 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 DCLRE1BQ9H816 532 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 TMEM100Q9NV29 134 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 MAGEL2Q9UJ55 1249 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 RPS6KA6Q9UK32 745 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 SIGLEC7Q9Y286 467 aa7.89□□□□□ -1.15
MCF2L-223ENST00000473345 RYR3Q15413 4870 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 SOCS2O14508 198 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 DVL1O14640 695 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 KHDRBS3O75525 346 aaKnown RBP7.88□□□□□ -1.15
MCF2L-223ENST00000473345 ATP6V1G2O95670 118 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 PPP1R3DO95685 299 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 LHBP01229 141 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 IFNA14P01570 189 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 OPN1MWP04001 364 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 CSF1P09603 554 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 OPN1MW2P0DN77 364 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 OPN1MW3P0DN78 364 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 ATP6V1B2P21281 511 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 RPS27P42677 84 aaKnown RBP7.88□□□□□ -1.15
MCF2L-223ENST00000473345 RPL15P61313 204 aaKnown RBP7.88□□□□□ -1.15
MCF2L-223ENST00000473345 ZNF92Q03936 586 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 ST3GAL3Q11203 375 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 SEC23BQ15437 767 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 ZBED5Q49AG3 693 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 GLYATQ6IB77 296 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 HCP5Q6MZN7 132 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 SLC18B1Q6NT16 456 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 C11orf87Q6NUJ2 197 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 LYPD4Q6UWN0 246 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 TMPRSS11FQ6ZWK6 438 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 MBOAT2Q6ZWT7 520 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 GLB1L2Q8IW92 636 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 PAPD5Q8NDF8 572 aaKnown RBP7.88□□□□□ -1.15
MCF2L-223ENST00000473345 LY6G5BQ8NDX9 201 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 OR2AE1Q8NHA4 323 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 TBC1D15Q8TC07 691 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 ZNRF4Q8WWF5 429 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 SLCO4A1Q96BD0 722 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 FAM46AQ96IP4 442 aaKnown RBP7.88□□□□□ -1.15
MCF2L-223ENST00000473345 MAP6Q96JE9 813 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 ZNF570Q96NI8 536 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 COQ7Q99807 217 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 NMNAT1Q9HAN9 279 aaPredicted RBP7.88□□□□□ -1.15
MCF2L-223ENST00000473345 NRIP3Q9NQ35 241 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 SIRT7Q9NRC8 400 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 MRPL22Q9NWU5 206 aaKnown RBP7.88□□□□□ -1.15
MCF2L-223ENST00000473345 GRHPRQ9UBQ7 328 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 RPUSD1Q9UJJ7 312 aaKnown RBP7.88□□□□□ -1.15
MCF2L-223ENST00000473345 BAG5Q9UL15 447 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 DOCK11Q5JSL3 2073 aa7.88□□□□□ -1.15
MCF2L-223ENST00000473345 ADARB2-AS1A8MUL3 147 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 F5H5K5 113 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 H3BNX3 289 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 J3QW42 95 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 PIN1P1O15428 100 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 GGT2P36268 569 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 RPL4P36578 427 aaKnown RBP7.87□□□□□ -1.15
MCF2L-223ENST00000473345 GUCA1AP43080 201 aaPredicted RBP7.87□□□□□ -1.15
MCF2L-223ENST00000473345 OMPP47874 163 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 SELENOWP63302 87 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 C2orf68Q2NKX9 166 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 ANKDD1AQ495B1 522 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 CRIP3Q6Q6R5 217 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 C1orf122Q6ZSJ8 110 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 C1orf87Q8N0U7 546 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 OR6V1Q8N148 313 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 FAM216BQ8N7L0 139 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 CELF2-AS1Q8N7Q2 184 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 SLC26A10Q8NG04 563 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 SLC7A13Q8TCU3 470 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 ACOT11Q8WXI4 607 aaPredicted RBP7.87□□□□□ -1.15
MCF2L-223ENST00000473345 CFHR4Q92496 578 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 GPX7Q96SL4 187 aaPredicted RBP7.87□□□□□ -1.15
MCF2L-223ENST00000473345 CCL13Q99616 98 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 TRIM15Q9C019 465 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 FN3KQ9H479 309 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 RNPEPL1Q9HAU8 725 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 DCAF13Q9NV06 445 aaKnown RBP7.87□□□□□ -1.15
MCF2L-223ENST00000473345 ARMC1Q9NVT9 282 aa7.87□□□□□ -1.15
MCF2L-223ENST00000473345 AURKAIP1Q9NWT8 199 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms