RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 MUC13Q9H3R2 512 aa13.89□□□□□ -0.19
USP40-212ENST00000473191 MIOXQ9UGB7 285 aa13.89□□□□□ -0.19
USP40-212ENST00000473191 TRAV40A0A0B4J280 105 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 LRRC30A6NM36 301 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 PTBP3O95758 552 aaKnown RBP13.88□□□□□ -0.19
USP40-212ENST00000473191 GRPP07492 148 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 EGR1P18146 543 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 PSMB10P40306 273 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 PITPNBP48739 271 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 EIF2B1Q14232 305 aaKnown RBP13.88□□□□□ -0.19
USP40-212ENST00000473191 KLHL12Q53G59 568 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 AWAT1Q58HT5 328 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 TEX30Q5JUR7 227 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 WDR25Q64LD2 544 aaPredicted RBP13.88□□□□□ -0.19
USP40-212ENST00000473191 DOK3Q7L591 496 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 PRSS45Q7RTY3 260 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 DPY19L4Q7Z388 723 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 ARHGAP24Q8N264 748 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 PARP8Q8N3A8 854 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 FGFRL1Q8N441 504 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 OR8B3Q8NGG8 313 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 OR6N2Q8NGY6 317 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 OTULINQ96BN8 352 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 OR8B2Q96RD0 313 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 JMJD8Q96S16 334 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 SMURF1Q9HCE7 757 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 CMC2Q9NRP2 79 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 DNAJC27Q9NZQ0 273 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 BAIAP2Q9UQB8 552 aa13.88□□□□□ -0.19
USP40-212ENST00000473191 A0A1B0GW55 424 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 ZNF878C9JN71 531 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 TNFRSF13BO14836 293 aaPredicted RBP13.87□□□□□ -0.19
USP40-212ENST00000473191 TBX1O43435 398 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 FSTL3O95633 263 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 CST1P01037 141 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 DUX4L2P0CJ85 424 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 DUX4L3P0CJ86 424 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 DUX4L4P0CJ87 422 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 DUX4L5P0CJ88 424 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 DUX4L6P0CJ89 424 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 DUX4L7P0CJ90 424 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 RAP2AP10114 183 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 IRF2P14316 349 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 PRKACGP22612 351 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 CX3CR1P49238 355 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 FAM3AP98173 230 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 TAF13Q15543 124 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 DUX4L9Q6RFH8 374 aaPredicted RBP13.87□□□□□ -0.19
USP40-212ENST00000473191 BRD3OSQ6XYD6 125 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 DCDC5Q6ZRR9 648 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 SLC16A9Q7RTY1 509 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 ERI1Q8IV48 349 aaKnown RBP13.87□□□□□ -0.19
USP40-212ENST00000473191 C11orf53Q8IXP5 236 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 C1orf87Q8N0U7 546 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 GIPC3Q8TF64 312 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 SPSB4Q96A44 273 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 SGK3Q96BR1 496 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 UPRTQ96BW1 309 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 NUDT16L1Q9BRJ7 211 aaKnown RBP13.87□□□□□ -0.19
USP40-212ENST00000473191 ABHD6Q9BV23 337 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 NTN4Q9HB63 628 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 C1orf123Q9NWV4 160 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 DUX4Q9UBX2 424 aa13.87□□□□□ -0.19
USP40-212ENST00000473191 PRPF19Q9UMS4 504 aaKnown RBP13.87□□□□□ -0.19
USP40-212ENST00000473191 IGHV3OR15-7A0A075B7D8 119 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 KIR2DS1A0A191URI9 304 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 RIIAD1A6NNX1 92 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 H3BN98 237 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 SELENOFO60613 162 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 PLATP00750 562 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 ZNF3P17036 446 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 CD300LDQ6UXZ3 194 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 FAM57BQ71RH2 274 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 TIGD4Q8IY51 512 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 GCSAMQ8N6F7 178 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 C3orf56Q8N813 242 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 OR11L1Q8NGX0 322 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 TEX47Q8TBZ9 253 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 ZMYND19Q96E35 227 aaPredicted RBP13.86□□□□□ -0.19
USP40-212ENST00000473191 SEH1LQ96EE3 360 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 MS4A7Q9GZW8 240 aaPredicted RBP13.86□□□□□ -0.19
USP40-212ENST00000473191 OR51V1Q9H2C8 321 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 MMADHCQ9H3L0 296 aaPredicted RBP13.86□□□□□ -0.19
USP40-212ENST00000473191 FN3KRPQ9HA64 309 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 BRD7Q9NPI1 651 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 MRPL15Q9P015 296 aaKnown RBP13.86□□□□□ -0.19
USP40-212ENST00000473191 PDP1Q9P0J1 537 aaPredicted RBP13.86□□□□□ -0.19
USP40-212ENST00000473191 RNF7Q9UBF6 113 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 CLN8Q9UBY8 286 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 KLHDC2Q9Y2U9 406 aa13.86□□□□□ -0.19
USP40-212ENST00000473191 GMDSO60547 372 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 IFNGP01579 166 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 GYPAP02724 150 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 ANXA2P07355 339 aaKnown RBP13.85□□□□□ -0.19
USP40-212ENST00000473191 SFTPBP07988 381 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 PRTN3P24158 256 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 POU1F1P28069 291 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 GSTT1P30711 240 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 GRK5P34947 590 aa13.85□□□□□ -0.19
USP40-212ENST00000473191 ZNF121P58317 390 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms