RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SLC2A1P11166 492 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 SPI1P17947 270 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 SLC25A1P53007 311 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 TEX30Q5JUR7 227 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 SFRP4Q6FHJ7 346 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-213ENST00000471978 OR2T5Q6IEZ7 315 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 LCN8Q6JVE9 175 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 ARHGAP24Q8N264 748 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 BOLLQ8N9W6 283 aaKnown RBP18.78■□□□□ 0.6
C9orf3-213ENST00000471978 PLPP7Q8NBV4 271 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 OR6K6Q8NGW6 343 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 OR2T29Q8NH02 315 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 SLC25A28Q96A46 364 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 NSL1Q96IY1 281 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 DGCR6LQ9BY27 220 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 MMADHCQ9H3L0 296 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-213ENST00000471978 MUC13Q9H3R2 512 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 DOCK11Q5JSL3 2073 aa18.78■□□□□ 0.6
C9orf3-213ENST00000471978 PTBP3O95758 552 aaKnown RBP18.77■□□□□ 0.6
C9orf3-213ENST00000471978 IFNGP01579 166 aa18.77■□□□□ 0.6
C9orf3-213ENST00000471978 RNASE1P07998 156 aaKnown RBP18.77■□□□□ 0.6
C9orf3-213ENST00000471978 CLUP10909 449 aa18.77■□□□□ 0.6
C9orf3-213ENST00000471978 PSMB10P40306 273 aa18.77■□□□□ 0.6
C9orf3-213ENST00000471978 TRIM25Q14258 630 aaKnown RBP18.77■□□□□ 0.6
C9orf3-213ENST00000471978 SLC9A3R2Q15599 337 aa18.77■□□□□ 0.6
C9orf3-213ENST00000471978 KCNJ8Q15842 424 aa18.77■□□□□ 0.6
C9orf3-213ENST00000471978 FAM98BQ52LJ0 330 aaKnown RBP18.77■□□□□ 0.6
C9orf3-213ENST00000471978 SPATC1Q76KD6 591 aa18.77■□□□□ 0.6
C9orf3-213ENST00000471978 OR56B2PQ8NGI1 322 aa18.77■□□□□ 0.6
C9orf3-213ENST00000471978 OPA3Q9H6K4 179 aa18.77■□□□□ 0.6
C9orf3-213ENST00000471978 RIIAD1A6NNX1 92 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 ZNF878C9JN71 531 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 C3orf80F5H4A9 247 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 CLDN34H7C241 214 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 LGALS8O00214 317 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 NPY4RP50391 375 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 FGF12P61328 243 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 MS4A2Q01362 244 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 OR8B8Q15620 311 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 SPERTQ8NA61 448 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 TECTBQ96PL2 329 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 ZNF747Q9BV97 191 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 C1orf123Q9NWV4 160 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 MEGF8Q7Z7M0 2845 aa18.76■□□□□ 0.59
C9orf3-213ENST00000471978 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.75■□□□□ 0.59
C9orf3-213ENST00000471978 DHRS12A0PJE2 317 aa18.75■□□□□ 0.59
C9orf3-213ENST00000471978 C22orf46C9J442 243 aa18.75■□□□□ 0.59
C9orf3-213ENST00000471978 XRCC2O43543 280 aa18.75■□□□□ 0.59
C9orf3-213ENST00000471978 ENSAO43768 121 aaKnown RBP18.75■□□□□ 0.59
C9orf3-213ENST00000471978 GRPP07492 148 aa18.75■□□□□ 0.59
C9orf3-213ENST00000471978 ZNF3P17036 446 aa18.75■□□□□ 0.59
C9orf3-213ENST00000471978 SLC15A1P46059 708 aa18.75■□□□□ 0.59
C9orf3-213ENST00000471978 BLVRAP53004 296 aa18.75■□□□□ 0.59
C9orf3-213ENST00000471978 ERVK-18Q9QC07 812 aa18.75■□□□□ 0.59
C9orf3-213ENST00000471978 CTSZQ9UBR2 303 aa18.75■□□□□ 0.59
C9orf3-213ENST00000471978 A6NLC8 198 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 TBX1O43435 398 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 CX3CR1P49238 355 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 GRB2P62993 217 aaKnown RBP18.74■□□□□ 0.59
C9orf3-213ENST00000471978 MZT1Q08AG7 82 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 EIF2B1Q14232 305 aaKnown RBP18.74■□□□□ 0.59
C9orf3-213ENST00000471978 LINC01590Q5TEZ4 76 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 CD276Q5ZPR3 534 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 BRD3OSQ6XYD6 125 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 OR10G2Q8NGC3 310 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 SPSB4Q96A44 273 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 CCT8L2Q96SF2 557 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 NIPSNAP1Q9BPW8 284 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 TRIM36Q9NQ86 728 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 CMC2Q9NRP2 79 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 C14orf119Q9NWQ9 140 aa18.74■□□□□ 0.59
C9orf3-213ENST00000471978 TRAV38-1A0A0B4J264 116 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 MDFIC2A0A1B0GVS7 189 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 OOEPA6NGQ2 149 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 ANKRD30BLA7E2S9 258 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 ADAM20O43506 726 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 ANXA2P07355 339 aaKnown RBP18.73■□□□□ 0.59
C9orf3-213ENST00000471978 HSD11B1P28845 292 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 DDOSTP39656 456 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 SHISA2Q6UWI4 295 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 ZNF826PQ6ZT77 177 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 TEX47Q8TBZ9 253 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 OTULINQ96BN8 352 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 TOR3AQ9H497 397 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 MED20Q9H944 212 aa18.73■□□□□ 0.59
C9orf3-213ENST00000471978 hCG_1807616A0A1W2PRN6 198 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 FAM183AA6NL82 134 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 TNFRSF13BO14836 293 aaPredicted RBP18.72■□□□□ 0.59
C9orf3-213ENST00000471978 NDUFA2O43678 99 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 RAP2AP10114 183 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 CALB2P22676 271 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 TIGD6Q17RP2 521 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 GPR157Q5UAW9 335 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 CD300LDQ6UXZ3 194 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 SLC16A9Q7RTY1 509 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 DPY19L4Q7Z388 723 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 ERI1Q8IV48 349 aaKnown RBP18.72■□□□□ 0.59
C9orf3-213ENST00000471978 IQCF1Q8N6M8 205 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 OR6N2Q8NGY6 317 aa18.72■□□□□ 0.59
C9orf3-213ENST00000471978 OR8S1Q8NH09 359 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms