RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TSSK6Q9BXA6 273 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 SEMA6AQ9H2E6 1030 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 MARCH7Q9H992 704 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 UNKLQ9H9P5 680 aaKnown RBP6.7□□□□□ -1.34
USP48-207ENST00000471752 TUBG2Q9NRH3 451 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 CENPMQ9NSP4 180 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 DDX28Q9NUL7 540 aaKnown RBP6.7□□□□□ -1.34
USP48-207ENST00000471752 C1orf123Q9NWV4 160 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 IL20Q9NYY1 176 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 DNAJB11Q9UBS4 358 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 ATPIF1Q9UII2 106 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 MAGEL2Q9UJ55 1249 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 KLHDC2Q9Y2U9 406 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 COMMD3-BMI1R4GMX3 469 aa6.7□□□□□ -1.34
USP48-207ENST00000471752 TRAV40A0A0B4J280 105 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 CENPVL3A0A0U1RRI6 287 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 DHRS12A0PJE2 317 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.69□□□□□ -1.34
USP48-207ENST00000471752 SURF4O15260 269 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 IDH3BO43837 385 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 LHBP01229 141 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 SPARCP09486 303 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 MMP9P14780 707 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 SPI1P17947 270 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 PRKACGP22612 351 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 MAGEA2P43356 314 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 TPTEP56180 551 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 GMFBP60983 142 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 ARF6P62330 175 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 GNB2P62879 340 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 CSNK2BP67870 215 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 OR8G1Q15617 311 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 PCK2Q16822 640 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 RASSF6Q6ZTQ3 369 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 PRSS45Q7RTY3 260 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 BBS1Q8NFJ9 593 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 OR5T2Q8NGG2 359 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 MCUR1Q96AQ8 359 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 CCL13Q99616 98 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 PCGF1Q9BSM1 259 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 MS4A7Q9GZW8 240 aaPredicted RBP6.69□□□□□ -1.34
USP48-207ENST00000471752 BRD7Q9NPI1 651 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 DNAJC27Q9NZQ0 273 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 RNF7Q9UBF6 113 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 MIOXQ9UGB7 285 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 OR5V1Q9UGF6 321 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 KCNG2Q9UJ96 466 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 LRCH1Q9Y2L9 728 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 RHBDD3Q9Y3P4 386 aa6.69□□□□□ -1.34
USP48-207ENST00000471752 FAM181BA6NEQ2 426 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 GGT3PA6NGU5 568 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 PRR32B1ATL7 298 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 LGALS8O00214 317 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 NDUFAB1O14561 156 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 ST8SIA5O15466 376 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 ADAM20O43506 726 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 GMNNO75496 209 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 CCNB2O95067 398 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 PTBP3O95758 552 aaKnown RBP6.68□□□□□ -1.34
USP48-207ENST00000471752 RNASE1P07998 156 aaKnown RBP6.68□□□□□ -1.34
USP48-207ENST00000471752 ZNF823P16415 610 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 ACKR3P25106 362 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 PAX6P26367 422 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 CFHR2P36980 270 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 SMIM11AP58511 58 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 FAM3AP98173 230 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 ECH1Q13011 328 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 OR8B8Q15620 311 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 MICAQ29983 383 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 ZNF181Q2M3W8 571 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 SLC36A3Q495N2 470 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 TMEM236Q5W0B7 351 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 DNM1P34Q6PK57 102 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 BRICD5Q6PL45 260 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 C9orf139Q6ZV77 190 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 FAM57BQ71RH2 274 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 SLC16A9Q7RTY1 509 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 MRPL21Q7Z2W9 205 aaKnown RBP6.68□□□□□ -1.34
USP48-207ENST00000471752 DPY19L4Q7Z388 723 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 MUC20Q8N307 709 aaPredicted RBP6.68□□□□□ -1.34
USP48-207ENST00000471752 PNKDQ8N490 385 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 KIR3DL3Q8N743 410 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 OR8B3Q8NGG8 313 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 ZMYND19Q96E35 227 aaPredicted RBP6.68□□□□□ -1.34
USP48-207ENST00000471752 NSL1Q96IY1 281 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 LYZL4Q96KX0 146 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 COG8Q96MW5 612 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 OR8B2Q96RD0 313 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 JMJD8Q96S16 334 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 CCT8L2Q96SF2 557 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 FEVQ99581 238 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 COPS4Q9BT78 406 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 ADAT1Q9BUB4 502 aaKnown RBP6.68□□□□□ -1.34
USP48-207ENST00000471752 MRI1Q9BV20 369 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 ABHD6Q9BV23 337 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 CHIAQ9BZP6 476 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 TRIM15Q9C019 465 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 WDR13Q9H1Z4 485 aa6.68□□□□□ -1.34
USP48-207ENST00000471752 MMADHCQ9H3L0 296 aaPredicted RBP6.68□□□□□ -1.34
USP48-207ENST00000471752 NTN4Q9HB63 628 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms