RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 PPP1R42Q7Z4L9 355 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 CMC1Q7Z7K0 106 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 UBE2J2Q8N2K1 259 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 TEX9Q8N6V9 391 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 EIF1ADQ8N9N8 165 aaKnown RBP0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 UBAC2Q8NBM4 344 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 NUBPLQ8TB37 319 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 KIFAP3Q92845 792 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 GHSRQ92847 366 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 YIPF5Q969M3 257 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 TRIM44Q96DX7 344 aaPredicted RBP0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 NRBF2Q96F24 287 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 CSPG4P5Q96PW8 444 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 OR2V2Q96R30 315 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 KCNS3Q9BQ31 491 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 GCOM2Q9BZD3 368 aaPredicted RBP0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 SLIRPQ9GZT3 109 aaKnown RBP0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 HYPKQ9NX55 129 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 SLC2A8Q9NY64 477 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 RWDD2AQ9UIY3 292 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 TENM1Q9UKZ4 2725 aa0.72□□□□□ -2.29
NCKAP1-203ENST00000471640 COL22A1Q8NFW1 1626 aaPredicted RBP0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 COL11A1P12107 1806 aaPredicted RBP0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 SDHAF1A6NFY7 115 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 H7C1H1 209 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 NDUFAB1O14561 156 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 FLOT1O75955 427 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 CPSF4O95639 269 aaKnown RBP0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 MAS1P04201 325 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 IGKV1-16P04430 117 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 IFI30P13284 250 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 ZNF24P17028 368 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 CTRB1P17538 263 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 NCF2P19878 526 aaPredicted RBP0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 RRM2P31350 389 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 PRPHP41219 470 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 EIF3EP60228 445 aaKnown RBP0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 BST1Q10588 318 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 ILKQ13418 452 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 SLC9A3R2Q15599 337 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 ZNF141Q15928 474 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 ZNF660Q6AZW8 331 aaPredicted RBP0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 OPN5Q6U736 354 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 TMPPEQ6ZT21 453 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 CBLN2Q8IUK8 224 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 ORMDL3Q8N138 153 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 LINC00469Q8N7U9 141 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 SLC25A29Q8N8R3 303 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 NECAB1Q8N987 351 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 SNX31Q8N9S9 440 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 ACTL9Q8TC94 416 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 RXFP4Q8TDU9 374 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 NT5C3BQ969T7 300 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 IGF2BP2-AS1Q96M15 143 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 OR4K3Q96R72 315 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 PLEKHF2Q9H8W4 249 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 RRAGDQ9NQL2 400 aaPredicted RBP0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 DYRK4Q9NR20 520 aa0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 FARSAQ9Y285 508 aaKnown RBP0.71□□□□□ -2.3
NCKAP1-203ENST00000471640 PCDH11XQ9BZA7 1347 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 PLXNB1O43157 2135 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 H7C0C1 242 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 CXCL11O14625 94 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 NMT2O60551 498 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 HPRT1P00492 218 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 IGHG2P01859 326 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 CBR1P16152 277 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 MYL9P24844 172 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 CD70P32970 193 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 PFN2P35080 140 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 ATP5OP48047 213 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 HNMTP50135 292 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 NDUFA8P51970 172 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 ZNF121P58317 390 aaPredicted RBP0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 RAB10P61026 200 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 KDSRQ06136 332 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 NAB1Q13506 487 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 TPBGQ13641 420 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 TRAM2Q15035 370 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 SSX2Q16385 188 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 CENPPQ6IPU0 288 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 REEP3Q6NUK4 255 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 CMTM1Q8IZ96 169 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 DRAM1Q8N682 238 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 BPIFCQ8NFQ6 507 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 OR7G2Q8NG99 324 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 OR9K2Q8NGE7 335 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 OR56B2PQ8NGI1 322 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 OR4C13Q8NGP0 309 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 KCNG3Q8TAE7 436 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 RSPH1Q8WYR4 309 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 RERGQ96A58 199 aaPredicted RBP0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 ECHDC3Q96DC8 303 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 C18orf15Q96N68 181 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 ZNF649Q9BS31 505 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 PIGUQ9H490 435 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 ZNF442Q9H7R0 627 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 INIPQ9NRY2 104 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 RGS18Q9NS28 235 aa0.7□□□□□ -2.3
NCKAP1-203ENST00000471640 SLC39A1Q9NY26 324 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms