RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ZNF469Q96JG9 3925 aaPredicted RBP12.97□□□□□ -0.33
SDC3-203ENST00000471567 TMEM269A0A1B0GVZ9 245 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 A0A1W2PQL4 384 aaPredicted RBP12.96□□□□□ -0.33
SDC3-203ENST00000471567 PSMD9O00233 223 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 CDC14BO60729 498 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 LILRA1O75019 489 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 TACSTD2P09758 323 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 GPR6P46095 362 aaPredicted RBP12.96□□□□□ -0.33
SDC3-203ENST00000471567 PRSS12P56730 875 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 FAM3AP98173 230 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 SLC3A1Q07837 685 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 ZNF771Q7L3S4 317 aaPredicted RBP12.96□□□□□ -0.33
SDC3-203ENST00000471567 DHRSXQ8N5I4 330 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 RFLNBQ8N5W9 214 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 OR10H4Q8NGA5 316 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 RNFT2Q96EX2 444 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 RNPEPL1Q9HAU8 725 aa12.96□□□□□ -0.33
SDC3-203ENST00000471567 A0A0U1RQV5 110 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 hCG_38984A0A1B0GV85 526 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 MLNRO43193 412 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 GMDSO60547 372 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 SULT1C4O75897 302 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 LY6G6DO95868 133 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 KRT8P05787 483 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 SRP9P49458 86 aaKnown RBP12.95□□□□□ -0.34
SDC3-203ENST00000471567 ACTC1P68032 377 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 ACTA1P68133 377 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 ADARB1P78563 741 aaKnown RBP12.95□□□□□ -0.34
SDC3-203ENST00000471567 IL18R1Q13478 541 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 SNCBQ16143 134 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 ZNF691Q5VV52 312 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 CLEC9AQ6UXN8 241 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 KLBQ86Z14 1044 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 CELF2-AS1Q8N7Q2 184 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 MAPK1IP1LQ8NDC0 245 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 OR8B12Q8NGG6 310 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 OR56B2PQ8NGI1 322 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 ITLN1Q8WWA0 313 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 OR2V2Q96R30 315 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 TBX5Q99593 518 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 SMR3AQ99954 134 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 TTTY10Q9BZA0 68 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 GSX1Q9H4S2 264 aaPredicted RBP12.95□□□□□ -0.34
SDC3-203ENST00000471567 MOB1AQ9H8S9 216 aa12.95□□□□□ -0.34
SDC3-203ENST00000471567 NKX1-2Q9UD57 310 aaPredicted RBP12.95□□□□□ -0.34
SDC3-203ENST00000471567 MRM2Q9UI43 246 aaKnown RBP12.95□□□□□ -0.34
SDC3-203ENST00000471567 EXOGQ9Y2C4 368 aaKnown RBP12.95□□□□□ -0.34
SDC3-203ENST00000471567 IGHV4-61A0A0C4DH41 118 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 METTL15A6NJ78 407 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 CLDN25C9JDP6 229 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 H0YAE9 185 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 H0YHG0 523 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 H0YL77 283 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 J3QRE1 110 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 PPIHO43447 177 aaKnown RBP12.94□□□□□ -0.34
SDC3-203ENST00000471567 SRSF10O75494 262 aaKnown RBP12.94□□□□□ -0.34
SDC3-203ENST00000471567 APOL3O95236 402 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 HEXAP06865 529 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 GSK3AP49840 483 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 CHN2P52757 468 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 ZNF91Q05481 1191 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 OR8B8Q15620 311 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 TMEM249Q2WGJ8 235 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 SPRNQ5BIV9 151 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 ZNF684Q5T5D7 378 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 PLEKHG7Q6ZR37 379 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 SSX6Q7RTT6 188 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 SPERTQ8NA61 448 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 SETD9Q8NE22 299 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 CSNK2A3Q8NEV1 391 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 OR10AD1Q8NGE0 317 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 CYGBQ8WWM9 190 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 CCL17Q92583 94 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 TIMD4Q96H15 378 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 MEGF10Q96KG7 1140 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 MYCBPQ99417 103 aaPredicted RBP12.94□□□□□ -0.34
SDC3-203ENST00000471567 PBOV1Q9GZY1 135 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 MRPS18AQ9NVS2 196 aaKnown RBP12.94□□□□□ -0.34
SDC3-203ENST00000471567 AASSQ9UDR5 926 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 NUFIP1Q9UHK0 495 aaKnown RBP12.94□□□□□ -0.34
SDC3-203ENST00000471567 RPL36Q9Y3U8 105 aaKnown RBP12.94□□□□□ -0.34
SDC3-203ENST00000471567 R4GMQ9 66 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 HSPE1-MOB4S4R3N1 261 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 CR1P17927 2039 aa12.94□□□□□ -0.34
SDC3-203ENST00000471567 CSPG4Q6UVK1 2322 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 ANKRD30BLA7E2S9 258 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 F5H5P2 479 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 LOC110117498-PIK3R3F6TDL0 507 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 MAGEB4O15481 346 aaPredicted RBP12.93□□□□□ -0.34
SDC3-203ENST00000471567 PNPP00491 289 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 HLA-DPB1P04440 258 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 DBTP11182 482 aaKnown RBP12.93□□□□□ -0.34
SDC3-203ENST00000471567 ATP6V1B1P15313 513 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 CA6P23280 308 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 CD200P41217 278 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 IL5RAQ01344 420 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 ZNF85Q03923 595 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 MZT1Q08AG7 82 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 RAB40BQ12829 278 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms