RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 OR5B12Q96R08 314 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 TMEM208Q9BTX3 173 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 TMEM109Q9BVC6 243 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 CDCA4Q9BXL8 241 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 CALN1Q9BXU9 219 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 PCBD2Q9H0N5 130 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 CWH43Q9H720 699 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 Q9HAA7 133 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 SPANXB1Q9NS25 103 aaPredicted RBP3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 NYAP2Q9P242 653 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 ENOPH1Q9UHY7 261 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 RAB26Q9ULW5 256 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 MGAT4AQ9UM21 535 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 PSG11Q9UQ72 335 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 KIAA0232Q92628 1395 aa3.63□□□□□ -1.83
PRPF40A-206ENST00000471167 EFCAB10A6NFE3 127 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 USP27XA6NNY8 438 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 EFCAB9A8MZ26 197 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 H7C2Y5 167 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 CXCR6O00574 342 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 CCL21O00585 134 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 BIRC5O15392 142 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 PRKYO43930 277 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 FADS1O60427 444 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 CDC40O60508 579 aaKnown RBP eCLIP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 RAD1O60671 282 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 GATBO75879 557 aaKnown RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 LYPD3O95274 346 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 THY1P04216 161 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 LGALS2P05162 132 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 CD5P06127 495 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 GUSBP08236 651 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 GIG44P09565 113 aaPredicted RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 HOXB7P09629 217 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 LIMS3P0CW19 117 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 LIMS4P0CW20 117 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 SLC2A1P11166 492 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 TBPP20226 339 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 PSMA1P25786 263 aaKnown RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 IL12AP29459 219 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 SSTR5P35346 364 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 SSR4P51571 173 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 PRKXP51817 358 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 RIDAP52758 137 aaKnown RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 STC1P52823 247 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 TAS2R31P59538 309 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 STXBP1P61764 594 aaKnown RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 RPS14P62263 151 aaKnown RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 RPL8P62917 257 aaKnown RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 UNC119Q13432 240 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 IL18R1Q13478 541 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 NDUFA5Q16718 116 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 UNC50Q53HI1 259 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 SPIN4Q56A73 249 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 DCST2Q5T1A1 773 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 OR52E8Q6IFG1 317 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 FAM131AQ6UXB0 335 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 CASP12Q6UXS9 341 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 STOX1Q6ZVD7 989 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 MBOAT2Q6ZWT7 520 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 PRSS48Q7RTY5 328 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 IFNEQ86WN2 208 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 CATSPER3Q86XQ3 398 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 FBXO16Q8IX29 292 aaPredicted RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 RIMKLAQ8IXN7 391 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 PDIK1LQ8N165 341 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 C12orf29Q8N999 325 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 OR2T33Q8NG76 320 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 OR10J5Q8NHC4 309 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 SYNPRQ8TBG9 265 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 MCOLN3Q8TDD5 553 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 MAFIPQ8WZ33 124 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 SMIM19Q96E16 107 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 DNAJA3Q96EY1 480 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 ZNF488Q96MN9 340 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 MS4A4EQ96PG1 132 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 OR8B4Q96RC9 309 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 GPR22Q99680 433 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 FOXC2Q99958 501 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 HCAR1Q9BXC0 346 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 UGT2B28Q9BY64 529 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 NXF2Q9GZY0 626 aaKnown RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 NAT10Q9H0A0 1025 aaKnown RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 WDR41Q9HAD4 459 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 CTPS2Q9NRF8 586 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 DDX19AQ9NUU7 478 aaKnown RBP3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 PRODH2Q9UF12 536 aa3.62□□□□□ -1.83
PRPF40A-206ENST00000471167 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 SMIM28A0A1B0GU29 152 aa3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 NEDD8-MDP1E9PL57 170 aa3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 NDUFA2O43678 99 aa3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 DUSP11O75319 330 aaKnown RBP3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 CNIH1O95406 144 aa3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 GCGP01275 180 aa3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 IGHG1P01857 330 aa3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 TYMSP04818 313 aa3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 BCHEP06276 602 aa3.61□□□□□ -1.83
PRPF40A-206ENST00000471167 WNT2P09544 360 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms