RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 MEGF9Q9H1U4 602 aa4.25□□□□□ -1.73
PTPN4-209ENST00000469511 MUC13Q9H3R2 512 aa4.25□□□□□ -1.73
PTPN4-209ENST00000469511 WDR55Q9H6Y2 383 aaPredicted RBP4.25□□□□□ -1.73
PTPN4-209ENST00000469511 FN3KRPQ9HA64 309 aa4.25□□□□□ -1.73
PTPN4-209ENST00000469511 INIPQ9NRY2 104 aa4.25□□□□□ -1.73
PTPN4-209ENST00000469511 TMEM140Q9NV12 185 aa4.25□□□□□ -1.73
PTPN4-209ENST00000469511 SLC25A37Q9NYZ2 338 aa4.25□□□□□ -1.73
PTPN4-209ENST00000469511 KIF17Q9P2E2 1029 aa4.25□□□□□ -1.73
PTPN4-209ENST00000469511 OAZ3Q9UMX2 235 aa4.25□□□□□ -1.73
PTPN4-209ENST00000469511 LSM4Q9Y4Z0 139 aaKnown RBP4.25□□□□□ -1.73
PTPN4-209ENST00000469511 KPTNQ9Y664 436 aa4.25□□□□□ -1.73
PTPN4-209ENST00000469511 PLECQ15149 4684 aaKnown RBP4.25□□□□□ -1.73
PTPN4-209ENST00000469511 A0A1B0GVI7 797 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 A0A1W2PRG6 482 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 LRRC30A6NM36 301 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 IQCF6A8MYZ5 107 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-209ENST00000469511 IFNL4K9M1U5 179 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 CLIC1O00299 241 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 FBP2O00757 339 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 SGCEO43556 437 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 CHP2O43745 196 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 FMO6PO60774 539 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ENTPD5O75356 428 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 PAHP00439 452 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 TSPAN19P0C672 248 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ZCCHC18P0CG32 403 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ETS2P15036 469 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 CTXN1P60606 82 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 TXNL4AP83876 142 aaKnown RBP4.24□□□□□ -1.73
PTPN4-209ENST00000469511 FHL1Q13642 323 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 PLA1AQ53H76 456 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 LDLRAD2Q5SZI1 272 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 TTC33Q6PID6 262 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-209ENST00000469511 METAP1DQ6UB28 335 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-209ENST00000469511 UNQ6126/PRO20091Q6UXV3 157 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 C18orf65Q6ZTR6 163 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 NANOGNBQ7Z5D8 188 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 WDR86Q86TI4 376 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 C11orf53Q8IXP5 236 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 C1orf87Q8N0U7 546 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 Q8N2B8 174 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 LRRC75AQ8NAA5 344 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 NPEPL1Q8NDH3 523 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 OR5T2Q8NGG2 359 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 OR5R1Q8NH85 324 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 SLC7A13Q8TCU3 470 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ADAMTS16Q8TE57 1224 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 TFAP2CQ92754 450 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ZBTB9Q96C00 473 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 RBMXL1Q96E39 390 aaKnown RBP4.24□□□□□ -1.73
PTPN4-209ENST00000469511 LYZL4Q96KX0 146 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ZNF582Q96NG8 517 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-209ENST00000469511 PRR25Q96S07 402 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ZNF426Q9BUY5 554 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 CHID1Q9BWS9 393 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 TSPYL1Q9H0U9 437 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 PCDHAC1Q9H158 963 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 RAD21L1Q9H4I0 556 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ARMC7Q9H6L4 198 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 PPP1R3EQ9H7J1 279 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ELL3Q9HB65 397 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-209ENST00000469511 POLE4Q9NR33 117 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 TMEM100Q9NV29 134 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 SELENONQ9NZV5 590 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 RNF7Q9UBF6 113 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 ZNF229Q9UJW7 825 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 SLC7A7Q9UM01 511 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 KIAA1109Q2LD37 5005 aa4.24□□□□□ -1.73
PTPN4-209ENST00000469511 UBE2QL1A1L167 161 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 OR6C6A6NF89 314 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 OOEPA6NGQ2 149 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 C5orf58C9J3I9 102 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 ACOT8O14734 319 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 RER1O15258 196 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 TYROBPO43914 113 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 OR7A10O76100 309 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 ANP32DO95626 131 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 LHBP01229 141 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 HIST1H2ABP04908 130 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 SERPINE1P05121 402 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 GRPP07492 148 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 NHLRC4P0CG21 123 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-209ENST00000469511 COX5BP10606 129 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 IRF2P14316 349 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 TNFRSF1BP20333 461 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 MSR1P21757 451 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 CA6P23280 308 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 EEF1B2P24534 225 aaKnown RBP4.23□□□□□ -1.73
PTPN4-209ENST00000469511 RPS19P39019 145 aaKnown RBP4.23□□□□□ -1.73
PTPN4-209ENST00000469511 CD200P41217 278 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 RPL14P50914 215 aaKnown RBP4.23□□□□□ -1.73
PTPN4-209ENST00000469511 UBE2E1P51965 193 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 ABCE1P61221 599 aaKnown RBP4.23□□□□□ -1.73
PTPN4-209ENST00000469511 NCALDP61601 193 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 SLC35A2P78381 396 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 CDK6Q00534 326 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 GK2Q14410 553 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-209ENST00000469511 MEP1BQ16820 701 aa4.23□□□□□ -1.73
PTPN4-209ENST00000469511 LRRC75BQ2VPJ9 315 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms