RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 ESCO2Q56NI9 601 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 KCTD18Q6PI47 426 aaPredicted RBP10.96□□□□□ -0.65
CLRN1-204ENST00000468836 RHOUQ7L0Q8 258 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 CELF2-AS1Q8N7Q2 184 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 SPERTQ8NA61 448 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 OR56B2PQ8NGI1 322 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 ERGIC1Q969X5 290 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 DUS3LQ96G46 650 aaKnown RBP10.96□□□□□ -0.65
CLRN1-204ENST00000468836 REPIN1Q9BWE0 567 aaKnown RBP10.96□□□□□ -0.65
CLRN1-204ENST00000468836 SEMA6AQ9H2E6 1030 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 NIPAL2Q9H841 368 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 UFSP2Q9NUQ7 469 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 C14orf119Q9NWQ9 140 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 ORC6Q9Y5N6 252 aa10.96□□□□□ -0.65
CLRN1-204ENST00000468836 ABCA1O95477 2261 aa10.96□□□□□ -0.66
CLRN1-204ENST00000468836 SAC3D1A6NKF1 404 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 A6NLC8 198 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 EBAG9O00559 213 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 PHF1O43189 567 aaPredicted RBP10.95□□□□□ -0.66
CLRN1-204ENST00000468836 MITFO75030 526 aaPredicted RBP10.95□□□□□ -0.66
CLRN1-204ENST00000468836 RPS2P15880 293 aaKnown RBP10.95□□□□□ -0.66
CLRN1-204ENST00000468836 GATA3P23771 443 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 OPRL1P41146 370 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 CD200P41217 278 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 ZMYND11Q15326 602 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 PRAMEF6Q5VXH4 476 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 LIPNQ5VXI9 398 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 NLRC3Q7RTR2 1065 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 SLC16A9Q7RTY1 509 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 COMMD2Q86X83 199 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 KLBQ86Z14 1044 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 C10orf67Q8IYJ2 551 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 PYDC1Q8WXC3 89 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 TMEM158Q8WZ71 300 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 CENPNQ96H22 339 aaPredicted RBP10.95□□□□□ -0.66
CLRN1-204ENST00000468836 CNN2Q99439 309 aaKnown RBP10.95□□□□□ -0.66
CLRN1-204ENST00000468836 MROQ9BYG7 248 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 YIPF3Q9GZM5 350 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 GABARAPL1Q9H0R8 117 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 RIBC2Q9H4K1 309 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 RGCCQ9H4X1 137 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 OCEL1Q9H607 264 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 METTL17Q9H7H0 456 aaPredicted RBP10.95□□□□□ -0.66
CLRN1-204ENST00000468836 PATZ1Q9HBE1 687 aaKnown RBP10.95□□□□□ -0.66
CLRN1-204ENST00000468836 OR5V1Q9UGF6 321 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 METRNQ9UJH8 293 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 OAZ3Q9UMX2 235 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 TMEM14AQ9Y6G1 99 aa10.95□□□□□ -0.66
CLRN1-204ENST00000468836 CHD3Q12873 2000 aaKnown RBP10.94□□□□□ -0.66
CLRN1-204ENST00000468836 PPIAL4EA0A075B759 164 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 hCG_1807616A0A1W2PRN6 198 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 SLC22A31A6NKX4 558 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 ANXA2P2A6NMY6 339 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 PPIAL4DF5H284 164 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 J3QLI3 93 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 PRKYO43930 277 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 ZNF205O95201 554 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 PPIAL4FP0DN26 164 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 GATA4P43694 442 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 HNRNPA0Q13151 305 aaKnown RBP10.94□□□□□ -0.66
CLRN1-204ENST00000468836 KCNJ8Q15842 424 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 ZNF181Q2M3W8 571 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 SLX4IPQ5VYV7 408 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 KDM4DQ6B0I6 523 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 ZFP1Q6P2D0 407 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 LRRN1Q6UXK5 716 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 LRRC28Q86X40 367 aaPredicted RBP10.94□□□□□ -0.66
CLRN1-204ENST00000468836 GID4Q8IVV7 300 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 TCEANCQ8N8B7 351 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 BOLLQ8N9W6 283 aaKnown RBP10.94□□□□□ -0.66
CLRN1-204ENST00000468836 CSNK2A3Q8NEV1 391 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 FAM81AQ8TBF8 368 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 TMEM163Q8TC26 289 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 DVL3Q92997 716 aaPredicted RBP10.94□□□□□ -0.66
CLRN1-204ENST00000468836 SIGLEC11Q96RL6 698 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 AMELYQ99218 206 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 TEAD3Q99594 435 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 CIB1Q99828 191 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 RBM4BQ9BQ04 359 aaKnown RBP10.94□□□□□ -0.66
CLRN1-204ENST00000468836 PAPOLGQ9BWT3 736 aaKnown RBP10.94□□□□□ -0.66
CLRN1-204ENST00000468836 IKZF2Q9UKS7 526 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 PPIAL4AQ9Y536 164 aa10.94□□□□□ -0.66
CLRN1-204ENST00000468836 ZAR1LA6NP61 321 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 CEACAM18A8MTB9 384 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 M0R129 80 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 PHYHO14832 338 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 TCF21O43680 179 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 FAM20BO75063 409 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 GRPP07492 148 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 SLC2A5P22732 501 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 THBS2P35442 1172 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 PSMA6P60900 246 aaKnown RBP10.93□□□□□ -0.66
CLRN1-204ENST00000468836 ACTR3P61158 418 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 GNB2P62879 340 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 MAB21L1Q13394 359 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 KPNB1Q14974 876 aaKnown RBP10.93□□□□□ -0.66
CLRN1-204ENST00000468836 OR8B8Q15620 311 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 ZNF829Q3KNS6 432 aaPredicted RBP10.93□□□□□ -0.66
CLRN1-204ENST00000468836 NXNL2Q5VZ03 156 aa10.93□□□□□ -0.66
CLRN1-204ENST00000468836 ASRGL1Q7L266 308 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms