RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 NIPSNAP1Q9BPW8 284 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 RNF7Q9UBF6 113 aa18.19■□□□□ 0.5
TTC28-204ENST00000468807 DNAJC9-AS1A6NH13 148 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 FAM183AA6NL82 134 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 A6NLC8 198 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 ANXA2P07355 339 aaKnown RBP18.18■□□□□ 0.5
TTC28-204ENST00000468807 GRPP07492 148 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 HSD11B1P28845 292 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 EIF2B1Q14232 305 aaKnown RBP18.18■□□□□ 0.5
TTC28-204ENST00000468807 OR8B8Q15620 311 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 ERI1Q8IV48 349 aaKnown RBP18.18■□□□□ 0.5
TTC28-204ENST00000468807 IQCF1Q8N6M8 205 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 OR56B2PQ8NGI1 322 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 OR6N2Q8NGY6 317 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 ASB9Q96DX5 294 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 CLPTM1LQ96KA5 538 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 NUDT16L1Q9BRJ7 211 aaKnown RBP18.18■□□□□ 0.5
TTC28-204ENST00000468807 NMNAT2Q9BZQ4 307 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 MED20Q9H944 212 aa18.18■□□□□ 0.5
TTC28-204ENST00000468807 MRPL15Q9P015 296 aaKnown RBP18.18■□□□□ 0.5
TTC28-204ENST00000468807 PRPF19Q9UMS4 504 aaKnown RBP18.18■□□□□ 0.5
TTC28-204ENST00000468807 TRAV40A0A0B4J280 105 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 DHRS12A0PJE2 317 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 C3orf80F5H4A9 247 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 FSTL3O95633 263 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 FAM107AO95990 144 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 CST1P01037 141 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 RAP2AP10114 183 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 SLC15A1P46059 708 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 CX3CR1P49238 355 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 BLVRAP53004 296 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 PAX2Q02962 417 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 AWAT1Q58HT5 328 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 ZNF48Q96MX3 618 aaPredicted RBP18.17■□□□□ 0.5
TTC28-204ENST00000468807 CMC2Q9NRP2 79 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 C1orf123Q9NWV4 160 aa18.17■□□□□ 0.5
TTC28-204ENST00000468807 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.16■□□□□ 0.5
TTC28-204ENST00000468807 hCG_1807616A0A1W2PRN6 198 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 GNGT2O14610 69 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 PHYHO14832 338 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 XRCC2O43543 280 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 PRTN3P24158 256 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 POU1F1P28069 291 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 GRB2P62993 217 aaKnown RBP18.16■□□□□ 0.5
TTC28-204ENST00000468807 KCNJ8Q15842 424 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 PCK2Q16822 640 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 TIGD6Q17RP2 521 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 TEX30Q5JUR7 227 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 WDR25Q64LD2 544 aaPredicted RBP18.16■□□□□ 0.5
TTC28-204ENST00000468807 GIPC3Q8TF64 312 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 ZMYND19Q96E35 227 aaPredicted RBP18.16■□□□□ 0.5
TTC28-204ENST00000468807 INTS14Q96SY0 518 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 FEVQ99581 238 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 THTPAQ9BU02 230 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 CHID1Q9BWS9 393 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 OPA3Q9H6K4 179 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 DNAJC27Q9NZQ0 273 aa18.16■□□□□ 0.5
TTC28-204ENST00000468807 SOX21Q9Y651 276 aaPredicted RBP18.16■□□□□ 0.5
TTC28-204ENST00000468807 KIR2DS1A0A191URI9 304 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 ANKRD30BLA7E2S9 258 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 T-ENOLP0DO92 83 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 MTNR1AP48039 350 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 GFOD2Q3B7J2 385 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 DPY19L4Q7Z388 723 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 OR8S1Q8NH09 359 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 UPRTQ96BW1 309 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 OR51V1Q9H2C8 321 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 BRD7Q9NPI1 651 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 ERVK-18Q9QC07 812 aa18.15■□□□□ 0.5
TTC28-204ENST00000468807 LGALS8O00214 317 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 ADAM20O43506 726 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 PPIAL4GP0DN37 164 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 PAICSP22234 425 aaKnown RBP18.14■□□□□ 0.49
TTC28-204ENST00000468807 GSTT1P30711 240 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 GRK5P34947 590 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 FGF12P61328 243 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 MZT1Q08AG7 82 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 LINC01590Q5TEZ4 76 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 ZNF826PQ6ZT77 177 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 FAM57BQ71RH2 274 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 SLC16A9Q7RTY1 509 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 SPERTQ8NA61 448 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 REEP6Q96HR9 211 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 TOR3AQ9H497 397 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 C14orf119Q9NWQ9 140 aa18.14■□□□□ 0.49
TTC28-204ENST00000468807 PDP1Q9P0J1 537 aaPredicted RBP18.14■□□□□ 0.49
TTC28-204ENST00000468807 TRAV38-1A0A0B4J264 116 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 OOEPA6NGQ2 149 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 C22orf46C9J442 243 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 ENSAO43768 121 aaKnown RBP18.13■□□□□ 0.49
TTC28-204ENST00000468807 PSMB10P40306 273 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 CD300LDQ6UXZ3 194 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 BRD3OSQ6XYD6 125 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 ZNF841Q6ZN19 808 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 ADGRG5Q8IZF4 528 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 PLPP7Q8NBV4 271 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 SLC25A28Q96A46 364 aa18.13■□□□□ 0.49
TTC28-204ENST00000468807 DACT3Q96B18 629 aaPredicted RBP18.13■□□□□ 0.49
TTC28-204ENST00000468807 C1orf147Q96MC9 270 aaPredicted RBP18.13■□□□□ 0.49
TTC28-204ENST00000468807 PCGF1Q9BSM1 259 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms