RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 REEP6Q96HR9 211 aa16.51■□□□□ 0.23
SMC4-209ENST00000468653 C5orf49A4QMS7 147 aa16.5■□□□□ 0.23
SMC4-209ENST00000468653 CRHP06850 196 aa16.5■□□□□ 0.23
SMC4-209ENST00000468653 HTR2CP28335 458 aa16.5■□□□□ 0.23
SMC4-209ENST00000468653 PITPNBP48739 271 aa16.5■□□□□ 0.23
SMC4-209ENST00000468653 SCAND1P57086 179 aa16.5■□□□□ 0.23
SMC4-209ENST00000468653 UBE2NP61088 152 aaKnown RBP16.5■□□□□ 0.23
SMC4-209ENST00000468653 BAK1Q16611 211 aa16.5■□□□□ 0.23
SMC4-209ENST00000468653 EIF2S3LQ2VIR3 472 aaKnown RBP16.5■□□□□ 0.23
SMC4-209ENST00000468653 OR51D1Q8NGF3 324 aa16.5■□□□□ 0.23
SMC4-209ENST00000468653 SNRNP40Q96DI7 357 aaKnown RBP16.5■□□□□ 0.23
SMC4-209ENST00000468653 NKX3-1Q99801 234 aaPredicted RBP16.5■□□□□ 0.23
SMC4-209ENST00000468653 RGCCQ9H4X1 137 aa16.5■□□□□ 0.23
SMC4-209ENST00000468653 B3GNT2Q9NY97 397 aa16.5■□□□□ 0.23
SMC4-209ENST00000468653 ZNF391Q9UJN7 358 aa16.5■□□□□ 0.23
SMC4-209ENST00000468653 A0A0G2JMP0 313 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 A0A0X1KG70 313 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 A0A1B0GVG6 124 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 PRRG2O14669 202 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 SULT1B1O43704 296 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 TOXO94900 526 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 THBS4P35443 961 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 ART1P52961 327 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 ZNF529Q6P280 563 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 GFRALQ6UXV0 394 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 C3P1Q6ZMU1 363 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 Q6ZSR3 168 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 MDP1Q86V88 176 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 CCDC36Q8IYA8 594 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 CMTM4Q8IZR5 234 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 OR4M2Q8NGB6 313 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 OR6M1Q8NGM8 313 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 FAM3DQ96BQ1 224 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 STARD4Q96DR4 205 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 SORCS2Q96PQ0 1159 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 C1QTNF5Q9BXJ0 243 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 PIGLQ9Y2B2 252 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 LOC390937A0A1W2PQ73 354 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 XRCC2O43543 280 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 OCMP0CE72 109 aaPredicted RBP16.49■□□□□ 0.23
SMC4-209ENST00000468653 CD37P11049 281 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 IL7P13232 177 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 CCL2P13500 99 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 FAHP16930 419 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 APLNRP35414 380 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 TIMP3P35625 211 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 RIN1Q13671 783 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 FAM166AQ6J272 317 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 Q8N402 240 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 RPRMLQ8N4K4 120 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 ZNF610Q8N9Z0 462 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 SEMA6DQ8NFY4 1073 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 OR52N4Q8NGI2 321 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 SYNPRQ8TBG9 265 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 AKAP1Q92667 903 aaKnown RBP eCLIP16.49■□□□□ 0.234e-24■■■■■ 140.6
SMC4-209ENST00000468653 C10orf35Q96D05 121 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 SLC25A38Q96DW6 304 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 ZFP3Q96NJ6 502 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 SLX1AQ9BQ83 275 aa16.49■□□□□ 0.23
SMC4-209ENST00000468653 OPN3Q9H1Y3 402 aaPredicted RBP16.49■□□□□ 0.23
SMC4-209ENST00000468653 MAGEB3O15480 346 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 POU3F4P49335 361 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 DEFA1P59665 94 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 DEFA3P59666 94 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 GABRA6Q16445 453 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 TRIM16LQ309B1 348 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 C2orf76Q3KRA6 126 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 C1orf100Q5SVJ3 147 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 PYHIN1Q6K0P9 492 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 CENPSQ8N2Z9 138 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 POC5Q8NA72 575 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 CHPT1Q8WUD6 406 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 RAB40AQ8WXH6 277 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 PP6455Q8WZ26 134 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 S100A16Q96FQ6 103 aaKnown RBP16.48■□□□□ 0.23
SMC4-209ENST00000468653 POM121L2Q96KW2 1035 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 ABCG5Q9H222 651 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 ASF1BQ9NVP2 202 aa16.48■□□□□ 0.23
SMC4-209ENST00000468653 MAP1BP46821 2468 aaKnown RBP16.47■□□□□ 0.23
SMC4-209ENST00000468653 LOC100289279A0A1B0GTE1 492 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 CGAP01215 116 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 CSF3P09919 207 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 EDN3P14138 238 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 COX5AP20674 150 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 MAP2K3P46734 347 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 TSC22D1Q15714 1073 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 BAIAP2L2Q6UXY1 529 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 COLCA1Q6ZS62 124 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 ZNF584Q8IVC4 421 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 GABRG1Q8N1C3 465 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 SLC25A28Q96A46 364 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 TP63Q9H3D4 680 aaPredicted RBP16.47■□□□□ 0.23
SMC4-209ENST00000468653 METTL17Q9H7H0 456 aaPredicted RBP16.47■□□□□ 0.23
SMC4-209ENST00000468653 RHBDL2Q9NX52 303 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 MRPS7Q9Y2R9 242 aaKnown RBP16.47■□□□□ 0.23
SMC4-209ENST00000468653 PIEZO2Q9H5I5 2752 aa16.47■□□□□ 0.23
SMC4-209ENST00000468653 DHRS7CA6NNS2 312 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 SERPINA5P05154 406 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 HCKP08631 526 aa16.46■□□□□ 0.23
SMC4-209ENST00000468653 HOXB1P14653 301 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms