RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CELP19835 753 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 RPL4P36578 427 aaKnown RBP12.45□□□□□ -0.42
COL27A1-203ENST00000468565 RPS7P62081 194 aaKnown RBP12.45□□□□□ -0.42
COL27A1-203ENST00000468565 KRTAP1-1Q07627 177 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 DDI2Q5TDH0 399 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 FOXL2NBQ6ZUU3 175 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 LAX1Q8IWV1 398 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 SLC37A3Q8NCC5 494 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 SETD6Q8TBK2 473 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 C10orf105Q8TEF2 133 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 VRK1Q99986 396 aaPredicted RBP12.45□□□□□ -0.42
COL27A1-203ENST00000468565 ALG8Q9BVK2 526 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 TMED9Q9BVK6 235 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 RAB1BQ9H0U4 201 aa12.45□□□□□ -0.42
COL27A1-203ENST00000468565 NDUFB2O95178 105 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 PPP1R3DO95685 299 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 LALBAP00709 142 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 NOS3P29474 1203 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 PDLIM4P50479 330 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 ERVK-25P63136 954 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 PLP2Q04941 152 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 FAM27BQ5VT28 67 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 FAM122BQ7Z309 247 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 KLBQ86Z14 1044 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 LRRC18Q8N456 261 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 MAPK1IP1LQ8NDC0 245 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 OR1J2Q8NGS2 313 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 NEU4Q8WWR8 484 aaPredicted RBP12.44□□□□□ -0.42
COL27A1-203ENST00000468565 NSMAFQ92636 917 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 GPX7Q96SL4 187 aaPredicted RBP12.44□□□□□ -0.42
COL27A1-203ENST00000468565 SDHCQ99643 169 aaPredicted RBP12.44□□□□□ -0.42
COL27A1-203ENST00000468565 BABAM2Q9NXR7 383 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 GRHPRQ9UBQ7 328 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 V9GYH0 126 aa12.44□□□□□ -0.42
COL27A1-203ENST00000468565 CCDC182A6NF36 153 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 NDUFS8O00217 210 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 GABRPO00591 440 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 GPRIN2O60269 458 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 ERCC1P07992 297 aaPredicted RBP12.43□□□□□ -0.42
COL27A1-203ENST00000468565 CDAP32320 146 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 LOXL1Q08397 574 aaPredicted RBP12.43□□□□□ -0.42
COL27A1-203ENST00000468565 POU4F2Q12837 409 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 GALEQ14376 348 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 MSMPQ1L6U9 139 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 TBC1D28Q2M2D7 210 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 OR10H4Q8NGA5 316 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 PTP4A1Q93096 173 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 TEAD3Q99594 435 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 OR51V1Q9H2C8 321 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 CDH20Q9HBT6 801 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 ABCB9Q9NP78 766 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 DYNLRB1Q9NP97 96 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 TRIM36Q9NQ86 728 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 KLHL21Q9UJP4 597 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 A0A1W2PQL4 384 aaPredicted RBP12.43□□□□□ -0.42
COL27A1-203ENST00000468565 XKRYO14609 159 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 RGS9O75916 674 aaPredicted RBP12.43□□□□□ -0.42
COL27A1-203ENST00000468565 LY6HO94772 140 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 MT-ND5P03915 603 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 TGM4P49221 684 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 ACTC1P68032 377 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 ACTA1P68133 377 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 CRMP1Q14194 572 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 SGCAQ16586 387 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 MESTQ5EB52 335 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 GPR139Q6DWJ6 353 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 FAM131AQ6UXB0 335 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 IQCF2Q8IXL9 164 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 HCAR1Q9BXC0 346 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 MRPL37Q9BZE1 423 aaKnown RBP12.43□□□□□ -0.42
COL27A1-203ENST00000468565 NRIP3Q9NQ35 241 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 HAO2Q9NYQ3 351 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 ADAM18Q9Y3Q7 739 aa12.43□□□□□ -0.42
COL27A1-203ENST00000468565 VWC2LB2RUY7 222 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 SYNGR3O43761 229 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 CST2P09228 141 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 ZNF32P17041 273 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 SLC2A5P22732 501 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 SDHAP31040 664 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 GUCA1AP43080 201 aaPredicted RBP12.42□□□□□ -0.42
COL27A1-203ENST00000468565 TAS2R43P59537 309 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 PPP3R1P63098 170 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 HSF2Q03933 536 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 TRAM1Q15629 374 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 PABPC1L2AQ5JQF8 200 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 DIRAS2Q96HU8 199 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 Q96M85 177 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 ERMAPQ96PL5 475 aaPredicted RBP12.42□□□□□ -0.42
COL27A1-203ENST00000468565 TBX5Q99593 518 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 SRRQ9GZT4 340 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 MIXL1Q9H2W2 232 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 ISG20L2Q9H9L3 353 aaKnown RBP12.42□□□□□ -0.42
COL27A1-203ENST00000468565 C14orf119Q9NWQ9 140 aa12.42□□□□□ -0.42
COL27A1-203ENST00000468565 LOC390937A0A1W2PQ73 354 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 PRSS37A4D1T9 235 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 FABP12A6NFH5 140 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 CD5LO43866 347 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 SBK2P0C263 348 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 SPNP16150 400 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 MSR1P21757 451 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms