RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 HTR1AP08908 422 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 DDOSTP39656 456 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 TGM4P49221 684 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 GBX2P52951 348 aaPredicted RBP13.69□□□□□ -0.22
GPC1-207ENST00000466624 IRF3Q14653 427 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 HLXQ14774 488 aaPredicted RBP13.69□□□□□ -0.22
GPC1-207ENST00000466624 CCDC58Q4VC31 144 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 TMEM255AQ5JRV8 349 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 NANOGP1Q8N7R0 232 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 ZNF485Q8NCK3 441 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 OR2G2Q8NGZ5 317 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 OR2AE1Q8NHA4 323 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 SPRYD4Q8WW59 207 aaPredicted RBP13.69□□□□□ -0.22
GPC1-207ENST00000466624 REEP6Q96HR9 211 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 CXorf56Q9H5V9 222 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 TAAR3PQ9P1P4 343 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 MYEF2Q9P2K5 600 aaKnown RBP13.69□□□□□ -0.22
GPC1-207ENST00000466624 CLEC2DQ9UHP7 191 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 LRCH1Q9Y2L9 728 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 N6AMT1Q9Y5N5 214 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 PMF1-BGLAPU3KQ54 211 aa13.69□□□□□ -0.22
GPC1-207ENST00000466624 TACC2O95359 2948 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 hCG_38984A0A1B0GV85 526 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 LOC390937A0A1W2PQ73 354 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 M0R233 179 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 ATP6V1B1P15313 513 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 PAX1P15863 534 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 PSMB10P40306 273 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 MMP15P51511 669 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 WNT4P56705 351 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 FAM3AP98173 230 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 OR8B8Q15620 311 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 ZMAT1Q5H9K5 638 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 WDR38Q5JTN6 314 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 OR2G6Q5TZ20 316 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 CCDC54Q8NEL0 328 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 SGCDQ92629 289 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 NRGNQ92686 78 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 MBD6Q96DN6 1003 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 MND1Q9BWT6 205 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 MS4A5Q9H3V2 200 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 BABAM2Q9NXR7 383 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 ERVK-18Q9QC07 812 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 GTF2A1LQ9UNN4 478 aa13.68□□□□□ -0.22
GPC1-207ENST00000466624 TIMM8AO60220 97 aaPredicted RBP13.67□□□□□ -0.22
GPC1-207ENST00000466624 ADH4P08319 380 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 RPSAP08865 295 aaKnown RBP13.67□□□□□ -0.22
GPC1-207ENST00000466624 UBCP0CG48 685 aaKnown RBP13.67□□□□□ -0.22
GPC1-207ENST00000466624 CCL1P22362 96 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 EEF1B2P24534 225 aaKnown RBP13.67□□□□□ -0.22
GPC1-207ENST00000466624 DNASE1P24855 282 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 KIR3DL2P43630 455 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 TAS2R43P59537 309 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 NANOS3P60323 173 aaKnown RBP13.67□□□□□ -0.22
GPC1-207ENST00000466624 ALKBH1Q13686 389 aaKnown RBP13.67□□□□□ -0.22
GPC1-207ENST00000466624 NKPD1Q17RQ9 610 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 OR2T2Q6IF00 324 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 Q6ZSR3 168 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 PRSS35Q8N3Z0 413 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 PLPP7Q8NBV4 271 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 OR8G5Q8NG78 346 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 RPS4Y2Q8TD47 263 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 LYZL4Q96KX0 146 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 CACNG6Q9BXT2 260 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 DYNLRB1Q9NP97 96 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 TRIM36Q9NQ86 728 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 BEX4Q9NWD9 120 aaPredicted RBP13.67□□□□□ -0.22
GPC1-207ENST00000466624 FRRS1LQ9P0K9 344 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 SLC22A13Q9Y226 551 aa13.67□□□□□ -0.22
GPC1-207ENST00000466624 CHD3Q12873 2000 aaKnown RBP13.67□□□□□ -0.22
GPC1-207ENST00000466624 A0A1B0GWJ7 208 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 PLSCR5A0PG75 271 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 TRIM64A6NGJ6 449 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 GGT3PA6NGU5 568 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 CD300LBA8K4G0 201 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 MT-ND2P03891 347 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 ISG15P05161 165 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 GSK3AP49840 483 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 BDH1Q02338 343 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 ACSM1Q08AH1 577 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 GFOD2Q3B7J2 385 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 ALKBH6Q3KRA9 238 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 KCTD21Q4G0X4 260 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 RPL22L1Q6P5R6 122 aaKnown RBP13.66□□□□□ -0.22
GPC1-207ENST00000466624 KRT74Q7RTS7 529 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 CDH24Q86UP0 819 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 CSNK2A3Q8NEV1 391 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 OR51E1Q8TCB6 317 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 PPP1R14AQ96A00 147 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 DIRC2Q96SL1 478 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 SLC22A4Q9H015 551 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 GPR84Q9NQS5 396 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 ZNF701Q9NV72 531 aaPredicted RBP13.66□□□□□ -0.22
GPC1-207ENST00000466624 MRPL15Q9P015 296 aaKnown RBP13.66□□□□□ -0.22
GPC1-207ENST00000466624 PLEKHA6Q9Y2H5 1048 aa13.66□□□□□ -0.22
GPC1-207ENST00000466624 LSM2Q9Y333 95 aaKnown RBP13.66□□□□□ -0.22
GPC1-207ENST00000466624 A0A1B0GTI1 187 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 TMEM212A6NML5 194 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 OR4C45A6NMZ5 311 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 DHRS7CA6NNS2 312 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms