RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ELAC2Q9BQ52 826 aaKnown RBP17.04■□□□□ 0.32
COL6A1-203ENST00000466285 SEMA6AQ9H2E6 1030 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 GORASP2Q9H8Y8 452 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 KRCC1Q9NPI7 259 aaPredicted RBP17.04■□□□□ 0.32
COL6A1-203ENST00000466285 MMP24Q9Y5R2 645 aa17.04■□□□□ 0.32
COL6A1-203ENST00000466285 A0A0U1RQK1 487 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 IGHV4-59P01825 116 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 CLUP10909 449 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 NOS3P29474 1203 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 PRKXP51817 358 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 TPTEP56180 551 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 PPP1R8Q12972 351 aaKnown RBP17.03■□□□□ 0.32
COL6A1-203ENST00000466285 ECH1Q13011 328 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 MALLQ13021 153 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 OR8B8Q15620 311 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 SLC36A3Q495N2 470 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 DCXRQ7Z4W1 244 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 PROKR2Q8NFJ6 384 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 WDFY2Q96P53 400 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 FN3KRPQ9HA64 309 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 VNN3Q9NY84 501 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 N6AMT1Q9Y5N5 214 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 CDH10Q9Y6N8 788 aa17.03■□□□□ 0.32
COL6A1-203ENST00000466285 TOX4O94842 621 aa17.02■□□□□ 0.32
COL6A1-203ENST00000466285 TFF1P04155 84 aa17.02■□□□□ 0.32
COL6A1-203ENST00000466285 GRPP07492 148 aa17.02■□□□□ 0.32
COL6A1-203ENST00000466285 CSNK2BP67870 215 aa17.02■□□□□ 0.32
COL6A1-203ENST00000466285 TSPAN31Q12999 210 aa17.02■□□□□ 0.32
COL6A1-203ENST00000466285 ZNF511Q8NB15 262 aa17.02■□□□□ 0.32
COL6A1-203ENST00000466285 SLC37A3Q8NCC5 494 aa17.02■□□□□ 0.32
COL6A1-203ENST00000466285 OR4Q3Q8NH05 313 aa17.02■□□□□ 0.32
COL6A1-203ENST00000466285 ERGIC1Q969X5 290 aa17.02■□□□□ 0.32
COL6A1-203ENST00000466285 CD300AQ9UGN4 299 aa17.02■□□□□ 0.32
COL6A1-203ENST00000466285 OOEPA6NGQ2 149 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 GGT3PA6NGU5 568 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.01■□□□□ 0.31
COL6A1-203ENST00000466285 NDUFAB1O14561 156 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 KNG1P01042 644 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 FABP3P05413 133 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 SPARCP09486 303 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 ATP6V1B2P21281 511 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 CRMP1Q14194 572 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 C11orf53Q8IXP5 236 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 PIP4P2Q8N4L2 257 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 GNPDA2Q8TDQ7 276 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 LHX4Q969G2 390 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 CITED1Q99966 193 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 FAM107BQ9H098 131 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 NSRP1Q9H0G5 558 aaKnown RBP17.01■□□□□ 0.31
COL6A1-203ENST00000466285 MAGEL2Q9UJ55 1249 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 LYVE1Q9Y5Y7 322 aa17.01■□□□□ 0.31
COL6A1-203ENST00000466285 IGHV1-69DA0A0B4J2H0 117 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 P2RY10O00398 339 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 DVL1O14640 695 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 IGHV1-69P01742 117 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 HSD17B1P14061 328 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 SELLP14151 372 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 ARF6P62330 175 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 ZNF770Q6IQ21 691 aaPredicted RBP17■□□□□ 0.31
COL6A1-203ENST00000466285 ZDHHC21Q8IVQ6 265 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 FAM216BQ8N7L0 139 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 OR4C15Q8NGM1 316 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 SPTSSAQ969W0 71 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 SLAMF6Q96DU3 332 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 CMTM5Q96DZ9 223 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 AMELYQ99218 206 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 COPS4Q9BT78 406 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 ERVK-18Q9QC07 812 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 KCNG2Q9UJ96 466 aa17■□□□□ 0.31
COL6A1-203ENST00000466285 hCG_1807616A0A1W2PRN6 198 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 A6NLC8 198 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 NDUFA7O95182 113 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 SOX14O95416 240 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 LHBP01229 141 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 ZNF823P16415 610 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 AMY2BP19961 511 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 PRDX6P30041 224 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 PCK2Q16822 640 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 KLHL12Q53G59 568 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 OLFML2AQ68BL7 652 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 BRICD5Q6PL45 260 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 BTN2A1Q7KYR7 527 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 NSMCE2Q96MF7 247 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 NMNAT2Q9BZQ4 307 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 IL1RAPQ9NPH3 570 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 NOX4Q9NPH5 578 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 ACOXLQ9NUZ1 547 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 ARL8BQ9NVJ2 186 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 MRPL15Q9P015 296 aaKnown RBP16.99■□□□□ 0.31
COL6A1-203ENST00000466285 ZNF319Q9P2F9 582 aa16.99■□□□□ 0.31
COL6A1-203ENST00000466285 IDH3BO43837 385 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 GPR137BO60478 399 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 GMDSO60547 372 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 NPY4RP50391 375 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 SMIM11AP58511 58 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 TEX36Q5VZQ5 186 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 DRAM2Q6UX65 266 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 OR4F5Q8NH21 305 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 ST8SIA4Q92187 359 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 CCL13Q99616 98 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms