RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SPATC1Q76KD6 591 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 OR6K6Q8NGW6 343 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 SLC7A6OSQ96CW6 309 aaPredicted RBP15.73■□□□□ 0.11
SF3A1-205ENST00000463818 DUX5Q96PT3 197 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 NUDT16L1Q9BRJ7 211 aaKnown RBP15.73■□□□□ 0.11
SF3A1-205ENST00000463818 FN3KRPQ9HA64 309 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 CLN8Q9UBY8 286 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 BLVRAP53004 296 aa15.72■□□□□ 0.11
SF3A1-205ENST00000463818 AWAT1Q58HT5 328 aa15.72■□□□□ 0.11
SF3A1-205ENST00000463818 CD300LDQ6UXZ3 194 aa15.72■□□□□ 0.11
SF3A1-205ENST00000463818 ZNF841Q6ZN19 808 aa15.72■□□□□ 0.11
SF3A1-205ENST00000463818 BOLLQ8N9W6 283 aaKnown RBP15.72■□□□□ 0.11
SF3A1-205ENST00000463818 SPERTQ8NA61 448 aa15.72■□□□□ 0.11
SF3A1-205ENST00000463818 OR10G2Q8NGC3 310 aa15.72■□□□□ 0.11
SF3A1-205ENST00000463818 UPRTQ96BW1 309 aa15.72■□□□□ 0.11
SF3A1-205ENST00000463818 NIPSNAP1Q9BPW8 284 aa15.72■□□□□ 0.11
SF3A1-205ENST00000463818 ADAT1Q9BUB4 502 aaKnown RBP15.72■□□□□ 0.11
SF3A1-205ENST00000463818 MRPL15Q9P015 296 aaKnown RBP15.72■□□□□ 0.11
SF3A1-205ENST00000463818 SOX21Q9Y651 276 aaPredicted RBP15.72■□□□□ 0.11
SF3A1-205ENST00000463818 DHRS12A0PJE2 317 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 RIIAD1A6NNX1 92 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 LGALS8O00214 317 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 PTBP3O95758 552 aaKnown RBP15.71■□□□□ 0.11
SF3A1-205ENST00000463818 HKR1P10072 659 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 BNIP1Q12981 228 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 LINC01590Q5TEZ4 76 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 SFRP4Q6FHJ7 346 aaPredicted RBP15.71■□□□□ 0.11
SF3A1-205ENST00000463818 PARP8Q8N3A8 854 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 PLPP7Q8NBV4 271 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 OR56B2PQ8NGI1 322 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 GIPC3Q8TF64 312 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 ASB9Q96DX5 294 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 LRGUKQ96M69 825 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 C1orf147Q96MC9 270 aaPredicted RBP15.71■□□□□ 0.11
SF3A1-205ENST00000463818 CHID1Q9BWS9 393 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 MED20Q9H944 212 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 CMC2Q9NRP2 79 aa15.71■□□□□ 0.11
SF3A1-205ENST00000463818 DNAJC9-AS1A6NH13 148 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 ZNF878C9JN71 531 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 PHYHO14832 338 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 TBX1O43435 398 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 XRCC2O43543 280 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 GRPP07492 148 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 RAP2AP10114 183 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 ZNF3P17036 446 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 PSMB10P40306 273 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 SLC15A1P46059 708 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 MTNR1AP48039 350 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 EIF2B1Q14232 305 aaKnown RBP15.7■□□□□ 0.1
SF3A1-205ENST00000463818 DNAL1Q4LDG9 190 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 DPY19L4Q7Z388 723 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 IQCF1Q8N6M8 205 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 OTULINQ96BN8 352 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 SGK3Q96BR1 496 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 ZMYND19Q96E35 227 aaPredicted RBP15.7■□□□□ 0.1
SF3A1-205ENST00000463818 CLPTM1LQ96KA5 538 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 FEVQ99581 238 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 C1orf123Q9NWV4 160 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 ERVK-18Q9QC07 812 aa15.7■□□□□ 0.1
SF3A1-205ENST00000463818 FAM183AA6NL82 134 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 C3orf80F5H4A9 247 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 H3BN98 237 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 TNFRSF13BO14836 293 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-205ENST00000463818 PLATP00750 562 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 CST1P01037 141 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 ANXA2P07355 339 aaKnown RBP15.69■□□□□ 0.1
SF3A1-205ENST00000463818 EGR1P18146 543 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 DDOSTP39656 456 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 CX3CR1P49238 355 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 GRB2P62993 217 aaKnown RBP15.69■□□□□ 0.1
SF3A1-205ENST00000463818 FOXL1Q12952 345 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 OR8B8Q15620 311 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 KCNJ8Q15842 424 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 ZNF826PQ6ZT77 177 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 C9orf139Q6ZV77 190 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 TEX47Q8TBZ9 253 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 SPSB4Q96A44 273 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 CCDC124Q96CT7 223 aaKnown RBP15.69■□□□□ 0.1
SF3A1-205ENST00000463818 INTS14Q96SY0 518 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 ABHD6Q9BV23 337 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 MMADHCQ9H3L0 296 aaPredicted RBP15.69■□□□□ 0.1
SF3A1-205ENST00000463818 TOR3AQ9H497 397 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 OPA3Q9H6K4 179 aa15.69■□□□□ 0.1
SF3A1-205ENST00000463818 ZMAT3Q9HA38 289 aaKnown RBP15.69■□□□□ 0.1
SF3A1-205ENST00000463818 TRAV40A0A0B4J280 105 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.68■□□□□ 0.1
SF3A1-205ENST00000463818 C22orf46C9J442 243 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 ACOT8O14734 319 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 HSD11B1P28845 292 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 GSTT1P30711 240 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 GRK5P34947 590 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 NPY4RP50391 375 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 FGF12P61328 243 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 FAM3AP98173 230 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 MZT1Q08AG7 82 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 GK3PQ14409 553 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 SLC9A3R2Q15599 337 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 ERI1Q8IV48 349 aaKnown RBP15.68■□□□□ 0.1
SF3A1-205ENST00000463818 ADGRG5Q8IZF4 528 aa15.68■□□□□ 0.1
SF3A1-205ENST00000463818 OR6N2Q8NGY6 317 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms