RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PNPLA2Q96AD5 504 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 C12orf43Q96C57 262 aaKnown RBP6.4□□□□□ -1.38
UBE4B-204ENST00000462658 INTS12Q96CB8 462 aaKnown RBP6.4□□□□□ -1.38
UBE4B-204ENST00000462658 OR2M2Q96R28 347 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 TAAR6Q96RI8 345 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 INTS14Q96SY0 518 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 MYCBPQ99417 103 aaPredicted RBP6.4□□□□□ -1.38
UBE4B-204ENST00000462658 DOK1Q99704 481 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 PRRG4Q9BZD6 226 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 WDR76Q9H967 626 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 ISG20L2Q9H9L3 353 aaKnown RBP6.4□□□□□ -1.38
UBE4B-204ENST00000462658 GLTPQ9NZD2 209 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 KLHL9Q9P2J3 617 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 SPRR3Q9UBC9 169 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 PLEKHB1Q9UF11 243 aaPredicted RBP6.4□□□□□ -1.38
UBE4B-204ENST00000462658 ENPP5Q9UJA9 477 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 LAMP5Q9UJQ1 280 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 COPS3Q9UNS2 423 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 CAMK2AQ9UQM7 478 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 FLVCR1Q9Y5Y0 555 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 TMEM14AQ9Y6G1 99 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 FASNP49327 2511 aaKnown RBP6.4□□□□□ -1.39
UBE4B-204ENST00000462658 TLN1Q9Y490 2541 aaKnown RBP6.39□□□□□ -1.39
UBE4B-204ENST00000462658 IGKV3D-15A0A087WSY6 115 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 H3BMQ9 156 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 GPR171O14626 319 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 PHYHO14832 338 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 MAGEB4O15481 346 aaPredicted RBP6.39□□□□□ -1.39
UBE4B-204ENST00000462658 WISP2O76076 250 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF432O94892 652 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 MPZL1O95297 269 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 LALBAP00709 142 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 CRYABP02511 175 aaKnown RBP6.39□□□□□ -1.39
UBE4B-204ENST00000462658 FGF2P09038 288 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF823P16415 610 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 GADD45AP24522 165 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 LAP3P28838 519 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 CAPZA2P47755 286 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 ENTPD1P49961 510 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 GBX2P52951 348 aaPredicted RBP6.39□□□□□ -1.39
UBE4B-204ENST00000462658 OR12D2P58182 307 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 ACTA2P62736 377 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 ACTG2P63267 376 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 BDH1Q02338 343 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 TPBGQ13641 420 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 INAQ16352 499 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 SSX1Q16384 188 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 MEP1BQ16820 701 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 ODF3L2Q3SX64 289 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 CDONQ4KMG0 1287 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 TP53I3Q53FA7 332 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 SOWAHCQ53LP3 525 aaPredicted RBP6.39□□□□□ -1.39
UBE4B-204ENST00000462658 LIPKQ5VXJ0 399 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 OTPQ5XKR4 325 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 PLXDC2Q6UX71 529 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 SLC16A12Q6ZSM3 486 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 AAED1Q7RTV5 226 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 MCEMP1Q8IX19 187 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 PHC2Q8IXK0 858 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 C20orf196Q8IYI0 205 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 TMEM123Q8N131 208 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 SYS1Q8N2H4 156 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 RFLNBQ8N5W9 214 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 SLC26A10Q8NG04 563 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 OTOSQ8NHW6 89 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 FNDC9Q8TBE3 224 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 RNF128Q8TEB7 428 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 ABHD3Q8WU67 409 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 THEM6Q8WUY1 208 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 SNRNP27Q8WVK2 155 aaKnown RBP6.39□□□□□ -1.39
UBE4B-204ENST00000462658 UFD1Q92890 307 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 C4orf36Q96KX1 117 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 BCL7BQ9BQE9 202 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 TTTY10Q9BZA0 68 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 MAP6D1Q9H9H5 199 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 DECR2Q9NUI1 292 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 MRPL22Q9NWU5 206 aaKnown RBP6.39□□□□□ -1.39
UBE4B-204ENST00000462658 TP53TG5Q9Y2B4 290 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 RELNP78509 3460 aa6.39□□□□□ -1.39
UBE4B-204ENST00000462658 FREM3P0C091 2139 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 A0A1B0GTH9 108 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 PNMA8CA0A1B0GUJ8 204 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 METTL15A6NJ78 407 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF724A8MTY0 619 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 E9PI62 339 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 AIREO43918 545 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 TMCC2O75069 709 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 MRPL33O75394 65 aaKnown RBP6.38□□□□□ -1.39
UBE4B-204ENST00000462658 AQP8O94778 261 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 GABARAPO95166 117 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 YES1P07947 543 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 SPARCP09486 303 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 TACSTD2P09758 323 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 PSKH1P11801 424 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 CELP19835 753 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 ALOX5APP20292 161 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 PSMA1P25786 263 aaKnown RBP6.38□□□□□ -1.39
UBE4B-204ENST00000462658 CDAP32320 146 aa6.38□□□□□ -1.39
UBE4B-204ENST00000462658 RPS27P42677 84 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms