RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 OR56B2PQ8NGI1 322 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 OR51G2Q8NGK0 314 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 REEP6Q96HR9 211 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 PGAM5Q96HS1 289 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 MROQ9BYG7 248 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 TTTY10Q9BZA0 68 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 OR10A2Q9H208 303 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 NARFLQ9H6Q4 476 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 GCM1Q9NP62 436 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 YAE1D1Q9NRH1 226 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 CLN6Q9NWW5 311 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 IMPAD1Q9NX62 359 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 SONP18583 2426 aaKnown RBP13.39□□□□□ -0.27
ERCC3-206ENST00000462306 ABCA2Q9BZC7 2435 aa13.39□□□□□ -0.27
ERCC3-206ENST00000462306 hCG_38984A0A1B0GV85 526 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 DLGAP1O14490 977 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 ZNF254O75437 659 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 ANPEPP15144 967 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 CA6P23280 308 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 DCTDP32321 178 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 SRP9P49458 86 aaKnown RBP13.38□□□□□ -0.27
ERCC3-206ENST00000462306 CXCR4P61073 352 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 LMO4P61968 165 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 SLC3A1Q07837 685 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 POU4F2Q12837 409 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 MAB21L1Q13394 359 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 TMED1Q13445 227 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 RCN1Q15293 331 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 OCLNQ16625 522 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 TIGD6Q17RP2 521 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 ZNF322Q6U7Q0 402 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-206ENST00000462306 RAB1CQ92928 201 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 SIGLEC11Q96RL6 698 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 SLC22A4Q9H015 551 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 TMEM106BQ9NUM4 274 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 FAM206AQ9NX38 181 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 MRPL15Q9P015 296 aaKnown RBP13.38□□□□□ -0.27
ERCC3-206ENST00000462306 PPP1R3CQ9UQK1 317 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 GMPPBQ9Y5P6 360 aa13.38□□□□□ -0.27
ERCC3-206ENST00000462306 ANK3Q12955 4377 aaKnown RBP13.38□□□□□ -0.27
ERCC3-206ENST00000462306 DYSFO75923 2080 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 ACOD1A6NK06 481 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 A8MV72 311 aaPredicted RBP13.37□□□□□ -0.27
ERCC3-206ENST00000462306 ZNF670-ZNF695F2Z2N8 137 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 PHYHO14832 338 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 MAGEB4O15481 346 aaPredicted RBP13.37□□□□□ -0.27
ERCC3-206ENST00000462306 GMDSO60547 372 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 ENTPD6O75354 484 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 SRSF10O75494 262 aaKnown RBP13.37□□□□□ -0.27
ERCC3-206ENST00000462306 APOL3O95236 402 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 GABRB1P18505 474 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 CFL1P23528 166 aaKnown RBP13.37□□□□□ -0.27
ERCC3-206ENST00000462306 DDOSTP39656 456 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 CD200P41217 278 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 GSK3AP49840 483 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 MMP16P51512 607 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 SSX6Q7RTT6 188 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 CELF2-AS1Q8N7Q2 184 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 OR8B12Q8NGG6 310 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 RFKQ969G6 155 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 TIMD4Q96H15 378 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 LYZL4Q96KX0 146 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 APOL4Q9BPW4 351 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 RGCCQ9H4X1 137 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 FAM118AQ9NWS6 357 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 AASSQ9UDR5 926 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 IKZF2Q9UKS7 526 aa13.37□□□□□ -0.27
ERCC3-206ENST00000462306 IGHV3-64DA0A0J9YX35 117 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 LOC100289279A0A1B0GTE1 492 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 LOC100130705A0A1B0GUX0 176 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 TMEM269A0A1B0GVZ9 245 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 A0A1W2PQL4 384 aaPredicted RBP13.36□□□□□ -0.27
ERCC3-206ENST00000462306 SLC16A6O15403 523 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 PTBP3O95758 552 aaKnown RBP13.36□□□□□ -0.27
ERCC3-206ENST00000462306 PNPP00491 289 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 OR2T7P0C7T2 308 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 PMELP40967 661 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 GATA4P43694 442 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 RIDAP52758 137 aaKnown RBP13.36□□□□□ -0.27
ERCC3-206ENST00000462306 CDH15P55291 814 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 EGR3Q06889 387 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 OR8G1Q15617 311 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 OR8B8Q15620 311 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 GFOD2Q3B7J2 385 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 MEDAGQ5VYS4 303 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 OR2T27Q8NH04 317 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 RHOXF1Q8NHV9 184 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 ZNF420Q8TAQ5 688 aaPredicted RBP13.36□□□□□ -0.27
ERCC3-206ENST00000462306 DVL3Q92997 716 aaPredicted RBP13.36□□□□□ -0.27
ERCC3-206ENST00000462306 TBX5Q99593 518 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 ADAT1Q9BUB4 502 aaKnown RBP13.36□□□□□ -0.27
ERCC3-206ENST00000462306 MRM2Q9UI43 246 aaKnown RBP13.36□□□□□ -0.27
ERCC3-206ENST00000462306 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.36□□□□□ -0.27
ERCC3-206ENST00000462306 NOP16Q9Y3C1 178 aaKnown RBP13.36□□□□□ -0.27
ERCC3-206ENST00000462306 NPTNQ9Y639 398 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 MALRD1Q5VYJ5 2156 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.36□□□□□ -0.275e-7■■■■□ 21.7
ERCC3-206ENST00000462306 NAV3Q8IVL0 2385 aa13.36□□□□□ -0.27
ERCC3-206ENST00000462306 FAM157AC9JC47 383 aa13.35□□□□□ -0.27
ERCC3-206ENST00000462306 TMEM178BH3BS89 294 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms