RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 RGS9O75916 674 aaPredicted RBP8.53□□□□□ -1.04
SF3A3-204ENST00000462258 APOC1P02654 83 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 HMGN1P05114 100 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 PRKACGP22612 351 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 RPS7P62081 194 aaKnown RBP8.53□□□□□ -1.04
SF3A3-204ENST00000462258 BNIP1Q12981 228 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 TIGD6Q17RP2 521 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 ZNF404Q494X3 552 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 KLHL12Q53G59 568 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 FAM201AQ5SY85 155 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 SHFQ7M4L6 423 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 DEFB108BQ8NET1 73 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 SEMA6DQ8NFY4 1073 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 NANPQ8TBE9 248 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 Q8TCH9 128 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 ZNF418Q8TF45 676 aaPredicted RBP8.53□□□□□ -1.04
SF3A3-204ENST00000462258 DNAJC9Q8WXX5 260 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 ERGIC1Q969X5 290 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 PLEKHA8Q96JA3 519 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 TEX12Q9BXU0 123 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 C7orf69Q9H7B7 122 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 FN3KRPQ9HA64 309 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 SLC25A19Q9HC21 320 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 PAPOLBQ9NRJ5 636 aaKnown RBP8.53□□□□□ -1.04
SF3A3-204ENST00000462258 UFSP2Q9NUQ7 469 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 DNAJC27Q9NZQ0 273 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 OPN4Q9UHM6 478 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 POLR3KQ9Y2Y1 108 aaPredicted RBP8.53□□□□□ -1.04
SF3A3-204ENST00000462258 A0A0A6YYJ9 748 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.52□□□□□ -1.05
SF3A3-204ENST00000462258 hCG_38984A0A1B0GV85 526 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 TRAPPC2LH3BP13 241 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 GMDSO60547 372 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 FSHBP01225 129 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 LYNP07948 512 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 H2BFMP0C1H6 154 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 ZNF12P17014 697 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 PMELP40967 661 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 OPRL1P41146 370 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 NAA10P41227 235 aaPredicted RBP8.52□□□□□ -1.05
SF3A3-204ENST00000462258 ZNF121P58317 390 aaPredicted RBP8.52□□□□□ -1.05
SF3A3-204ENST00000462258 CDK5Q00535 292 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 MPPED2Q15777 294 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 GFOD2Q3B7J2 385 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 ARMCX4Q5H9R4 360 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 SLC35D3Q5M8T2 416 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 TMEM236Q5W0B7 351 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 FAM57BQ71RH2 274 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 NLRC3Q7RTR2 1065 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 SLC16A9Q7RTY1 509 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 KLBQ86Z14 1044 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 CPOQ8IVL8 374 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 ZNF454Q8N9F8 522 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 BBS1Q8NFJ9 593 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 OR8B3Q8NGG8 313 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 OTOSQ8NHW6 89 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 SPSB4Q96A44 273 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 NRBF2Q96F24 287 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 NEIL1Q96FI4 390 aaPredicted RBP8.52□□□□□ -1.05
SF3A3-204ENST00000462258 REEP6Q96HR9 211 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 OR8B2Q96RD0 313 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 SLC6A7Q99884 636 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 TMEM246Q9BRR3 403 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 MRI1Q9BV20 369 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 SSBP3Q9BWW4 388 aaPredicted RBP8.52□□□□□ -1.05
SF3A3-204ENST00000462258 SP140LQ9H930 580 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 NTN4Q9HB63 628 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 TMEM165Q9HC07 324 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 MMP26Q9NRE1 261 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 PPIAL4AQ9Y536 164 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 INSIG2Q9Y5U4 225 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 DOCK11Q5JSL3 2073 aa8.52□□□□□ -1.05
SF3A3-204ENST00000462258 A6NLC8 198 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 ANKRD30BLA7E2S9 258 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 VENTXO95231 258 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 FSTL3O95633 263 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 PTBP3O95758 552 aaKnown RBP8.51□□□□□ -1.05
SF3A3-204ENST00000462258 WNT2P09544 360 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 SLC2A5P22732 501 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 CFL1P23528 166 aaKnown RBP8.51□□□□□ -1.05
SF3A3-204ENST00000462258 CPT2P23786 658 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 CD80P33681 288 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 PITPNBP48739 271 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 RASSF2P50749 326 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 HILS1P60008 231 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 PSMA6P60900 246 aaKnown RBP8.51□□□□□ -1.05
SF3A3-204ENST00000462258 GNB2P62879 340 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 HOXA4Q00056 320 aaPredicted RBP8.51□□□□□ -1.05
SF3A3-204ENST00000462258 ZNF154Q13106 437 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 ATP6AP1Q15904 470 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 SNAPC1Q16533 368 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 C1orf146Q5VVC0 180 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 FAHD1Q6P587 224 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 DCDC5Q6ZRR9 648 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 RHOUQ7L0Q8 258 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 PRSS45Q7RTY3 260 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 PARP8Q8N3A8 854 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 BPIFB2Q8N4F0 458 aa8.51□□□□□ -1.05
SF3A3-204ENST00000462258 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.51□□□□□ -1.05
SF3A3-204ENST00000462258 SPERTQ8NA61 448 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms